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Protein

50S ribosomal protein L29, chloroplastic

Gene

RPL29

Organism
Zea mays (Maize)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L29, chloroplastic
Alternative name(s):
CL29
Gene namesi
Name:RPL29
OrganismiZea mays (Maize)
Taxonomic identifieri4577 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeZea
ProteomesiUP000007305: Unplaced

Organism-specific databases

GrameneiQ9SWI6.
MaizeGDBi231181.

Subcellular locationi

GO - Cellular componenti

  1. chloroplast Source: UniProtKB-SubCell
  2. ribosome Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Chloroplast, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transit peptidei1 – 6161ChloroplastBy similarityAdd
BLAST
Chaini62 – 16110050S ribosomal protein L29, chloroplasticPRO_0000030511Add
BLAST

Expressioni

Developmental stagei

Present at low levels even in etiolated seedlings, expression increases in both bundle sheat and mesophyll cells upon greening.

Inductioni

By light.

Gene expression databases

ExpressionAtlasiQ9SWI6. baseline.

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.

Structurei

3D structure databases

ProteinModelPortaliQ9SWI6.
SMRiQ9SWI6. Positions 63-127.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L29P family.Curated

Keywords - Domaini

Transit peptide

Phylogenomic databases

HOGENOMiHOG000239499.
KOiK02904.
OMAiAMPTEKI.

Family and domain databases

Gene3Di1.10.287.310. 1 hit.
HAMAPiMF_00374. Ribosomal_L29.
InterProiIPR001854. Ribosomal_L29.
[Graphical view]
PfamiPF00831. Ribosomal_L29. 1 hit.
[Graphical view]
SUPFAMiSSF46561. SSF46561. 1 hit.
TIGRFAMsiTIGR00012. L29. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9SWI6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MATMSLAAAS PLASIPRGIA AQAPCAAFLS IRLGGATATR FAGLAVASQP
60 70 80 90 100
AERRAAAMVA MAKREQELEE IRAMTTEQME EEVVDLKGEL FLLRLKRSAR
110 120 130 140 150
QEFKNSEFSR MRKRIARMLT VKREREIEQG INKRLSRKLD RKWKQSIVVR
160
PPPSLRGNKE E
Length:161
Mass (Da):18,093
Last modified:May 1, 2000 - v1
Checksum:i78500CE9B11D3321
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF147725 mRNA. Translation: AAD50383.1.
RefSeqiNP_001104944.1. NM_001111474.1.
UniGeneiZm.84159.

Genome annotation databases

EnsemblPlantsiGRMZM2G028216_T01; GRMZM2G028216_P01; GRMZM2G028216.
GeneIDi541790.
KEGGizma:541790.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF147725 mRNA. Translation: AAD50383.1.
RefSeqiNP_001104944.1. NM_001111474.1.
UniGeneiZm.84159.

3D structure databases

ProteinModelPortaliQ9SWI6.
SMRiQ9SWI6. Positions 63-127.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiGRMZM2G028216_T01; GRMZM2G028216_P01; GRMZM2G028216.
GeneIDi541790.
KEGGizma:541790.

Organism-specific databases

GrameneiQ9SWI6.
MaizeGDBi231181.

Phylogenomic databases

HOGENOMiHOG000239499.
KOiK02904.
OMAiAMPTEKI.

Gene expression databases

ExpressionAtlasiQ9SWI6. baseline.

Family and domain databases

Gene3Di1.10.287.310. 1 hit.
HAMAPiMF_00374. Ribosomal_L29.
InterProiIPR001854. Ribosomal_L29.
[Graphical view]
PfamiPF00831. Ribosomal_L29. 1 hit.
[Graphical view]
SUPFAMiSSF46561. SSF46561. 1 hit.
TIGRFAMsiTIGR00012. L29. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Subpopulations of chloroplast ribosomes change during photoregulated development of Zea mays leaves: ribosomal proteins L2, L21, and L29."
    Zhao Y.-Y., Xu T., Zucchi P., Bogorad L.
    Proc. Natl. Acad. Sci. U.S.A. 96:8997-9002(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA], EXPRESSION DURING GREENING.
    Strain: cv. FR9cms X FR37.
    Tissue: Bundle sheath cell, Etiolated seedling and Mesophyll cell.

Entry informationi

Entry nameiRK29_MAIZE
AccessioniPrimary (citable) accession number: Q9SWI6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 13, 2004
Last sequence update: May 1, 2000
Last modified: February 4, 2015
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.