Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q9SWI6 (RK29_MAIZE) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 66. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
50S ribosomal protein L29, chloroplastic
Alternative name(s):
CL29
Gene names
Name:RPL29
OrganismZea mays (Maize)
Taxonomic identifier4577 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeZea

Protein attributes

Sequence length161 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Subunit structure

Part of the 50S ribosomal subunit.

Subcellular location

Plastidchloroplast HAMAP-Rule MF_00374.

Developmental stage

Present at low levels even in etiolated seedlings, expression increases in both bundle sheat and mesophyll cells upon greening. HAMAP-Rule MF_00374

Induction

By light. HAMAP-Rule MF_00374

Sequence similarities

Belongs to the ribosomal protein L29P family.

Ontologies

Keywords
   Cellular componentChloroplast
Plastid
   DomainTransit peptide
   Molecular functionRibonucleoprotein
Ribosomal protein
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular_componentchloroplast envelope

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

chloroplast stroma

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

nucleoid

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

ribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionstructural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Transit peptide1 – 6161Chloroplast By similarity
Chain62 – 16110050S ribosomal protein L29, chloroplastic HAMAP-Rule MF_00374
PRO_0000030511

Sequences

Sequence LengthMass (Da)Tools
Q9SWI6 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 78500CE9B11D3321

FASTA16118,093
        10         20         30         40         50         60 
MATMSLAAAS PLASIPRGIA AQAPCAAFLS IRLGGATATR FAGLAVASQP AERRAAAMVA 

        70         80         90        100        110        120 
MAKREQELEE IRAMTTEQME EEVVDLKGEL FLLRLKRSAR QEFKNSEFSR MRKRIARMLT 

       130        140        150        160 
VKREREIEQG INKRLSRKLD RKWKQSIVVR PPPSLRGNKE E 

« Hide

References

[1]"Subpopulations of chloroplast ribosomes change during photoregulated development of Zea mays leaves: ribosomal proteins L2, L21, and L29."
Zhao Y.-Y., Xu T., Zucchi P., Bogorad L.
Proc. Natl. Acad. Sci. U.S.A. 96:8997-9002(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA], EXPRESSION DURING GREENING.
Strain: cv. FR9cms X FR37.
Tissue: Bundle sheath cell, Etiolated seedling and Mesophyll cell.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF147725 mRNA. Translation: AAD50383.1.
RefSeqNP_001104944.1. NM_001111474.1.
UniGeneZm.84159.

3D structure databases

ProteinModelPortalQ9SWI6.
SMRQ9SWI6. Positions 63-127.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID541790.
KEGGzma:541790.

Organism-specific databases

GrameneQ9SWI6.
MaizeGDB231181.

Phylogenomic databases

HOGENOMHOG000239499.
KOK02904.
OMARMAKREQ.

Family and domain databases

Gene3D1.10.287.310. 1 hit.
HAMAPMF_00374. Ribosomal_L29.
InterProIPR001854. Ribosomal_L29.
[Graphical view]
PfamPF00831. Ribosomal_L29. 1 hit.
[Graphical view]
SUPFAMSSF46561. SSF46561. 1 hit.
TIGRFAMsTIGR00012. L29. 1 hit.
ProtoNetSearch...

Entry information

Entry nameRK29_MAIZE
AccessionPrimary (citable) accession number: Q9SWI6
Entry history
Integrated into UniProtKB/Swiss-Prot: April 13, 2004
Last sequence update: May 1, 2000
Last modified: July 9, 2014
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries