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Q9SW93 (SCA_LILLO) Reviewed, UniProtKB/Swiss-Prot

Last modified March 6, 2013. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Stigma/stylar cysteine-rich adhesin
Alternative name(s):
Lipid transfer protein
Gene names
Name:SCA
Synonyms:LTP
OrganismLilium longiflorum (Trumpet lily)
Taxonomic identifier4690 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaLilialesLiliaceaeLilium

Protein attributes

Sequence length113 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Acts as an adhesive agent between the pollen tube wall and the stylar transmitting tract epidermis. Binds a stylar pectin in a pH-dependent manner. Enhances activity of chemocyanin, a diffusible chemotropic factor.

Tissue specificity

Highly expressed in style and stigma, abundant in young leaves and petals, and low expression in young anthers at pollen mother cell stage with an active tapetum. Not expressed in mature leaves or in pollen grains or tubes. Found in the stylar transmitting tract epidermis and in the stylar extracellular matrix. Ref.1 Ref.3

Developmental stage

Expressed throughout development of the stigma and style, and then decreases at 6 days after anthesis. Ref.3

Sequence similarities

Belongs to the plant LTP family.

Ontologies

Keywords
   Biological processTransport
   DomainSignal
   LigandLipid-binding
   PTMDisulfide bond
   Technical termDirect protein sequencing
Gene Ontology (GO)
   Biological_processlipid transport

Inferred from electronic annotation. Source: InterPro

   Molecular_functionlipid binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2222 Ref.1
Chain23 – 11391Stigma/stylar cysteine-rich adhesin
PRO_0000018417

Amino acid modifications

Disulfide bond25 ↔ 72 By similarity
Disulfide bond35 ↔ 49 By similarity
Disulfide bond50 ↔ 95 By similarity
Disulfide bond70 ↔ 109 By similarity

Sequences

Sequence LengthMass (Da)Tools
Q9SW93 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: F2E3D9725EFBE83A

FASTA11311,686
        10         20         30         40         50         60 
MARSSAVCFL LLLAFLIGTA SAITCGQVDS DLTSCLGYAR KGGVIPPGCC AGVRTLNNLA 

        70         80         90        100        110 
KTTPDRQTAC NCLKSLVNPS LGLNAAIVAG IPGKCGVNIP YPIRMQTDCN KVR 

« Hide

References

[1]"A lipid transfer-like protein is necessary for lily pollen tube adhesion to an in vitro stylar matrix."
Park S.Y., Jauh G.Y., Mollet J.-C., Eckard K.J., Nothnagel E.A., Walling L.L., Lord E.M.
Plant Cell 12:151-164(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA], PROTEIN SEQUENCE OF 23-57, TISSUE SPECIFICITY.
Strain: cv. Nellie white.
[2]"A lily stylar pectin is necessary for pollen tube adhesion to an in vitro stylar matrix."
Mollet J.-C., Park S.Y., Nothnagel E.A., Lord E.M.
Plant Cell 12:1737-1750(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: PECTIN BINDING.
[3]"Expression studies of SCA in lily and confirmation of its role in pollen tube adhesion."
Park S.Y., Lord E.M.
Plant Mol. Biol. 51:183-189(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: TISSUE SPECIFICITY, DEVELOPMENTAL STAGE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF171094 mRNA. Translation: AAD46683.1.

3D structure databases

ProteinModelPortalQ9SW93.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR016140. Bifunc_inhib/LTP/seed_store.
IPR000528. Plant_LTP.
[Graphical view]
PfamPF00234. Tryp_alpha_amyl. 1 hit.
[Graphical view]
PRINTSPR00382. LIPIDTRNSFER.
SMARTSM00499. AAI. 1 hit.
[Graphical view]
SUPFAMSSF47699. Bifunc_inhib/LTP/seed_store. 1 hit.
PROSITEPS00597. PLANT_LTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSCA_LILLO
AccessionPrimary (citable) accession number: Q9SW93
Entry history
Integrated into UniProtKB/Swiss-Prot: March 1, 2004
Last sequence update: May 1, 2000
Last modified: March 6, 2013
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families