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Protein

Probable cysteine protease RDL4

Gene

RDL4

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at transcript leveli

Functioni

Probable thiol protease.By similarity

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei161PROSITE-ProRule annotation1
Active sitei297PROSITE-ProRule annotation1
Active sitei317PROSITE-ProRule annotation1

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Protease, Thiol protease

Protein family/group databases

MEROPSiI29.003.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable cysteine protease RDL4Curated (EC:3.4.22.-Curated)
Alternative name(s):
Cysteine protease 11 Publication
Short name:
AtCP11 Publication
Probable cysteine proteinase At4g11310Curated
RD21A-like protease 4Curated
Gene namesi
Name:RDL4Curated
Synonyms:CP11 Publication
Ordered Locus Names:At4g11310
ORF Names:F8L21.100
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

TAIRiAT4G11310.

Subcellular locationi

GO - Cellular componenti

  • cell wall Source: TAIR
  • extracellular space Source: GO_Central
  • lysosome Source: GO_Central
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 23Sequence analysisAdd BLAST23
PropeptideiPRO_000002646324 – 136Activation peptideCuratedAdd BLAST113
ChainiPRO_0000026464137 – 364Probable cysteine protease RDL4Add BLAST228

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi87N-linked (GlcNAc...)PROSITE-ProRule annotation1
Disulfide bondi158 ↔ 199By similarity
Disulfide bondi192 ↔ 232By similarity
Disulfide bondi291 ↔ 342By similarity

Keywords - PTMi

Disulfide bond, Glycoprotein, Zymogen

Proteomic databases

PaxDbiQ9SUT0.

PTM databases

iPTMnetiQ9SUT0.

Expressioni

Tissue specificityi

Expressed in inflorescences.1 Publication

Gene expression databases

GenevisibleiQ9SUT0. AT.

Interactioni

Protein-protein interaction databases

BioGridi12032. 4 interactors.
IntActiQ9SUT0. 3 interactors.
STRINGi3702.AT4G11310.1.

Structurei

3D structure databases

ProteinModelPortaliQ9SUT0.
SMRiQ9SUT0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the peptidase C1 family.PROSITE-ProRule annotation

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiKOG1543. Eukaryota.
COG4870. LUCA.
HOGENOMiHOG000230773.
InParanoidiQ9SUT0.
OMAiEVCHGAD.
OrthoDBiEOG093613VO.
PhylomeDBiQ9SUT0.

Family and domain databases

InterProiIPR025660. Pept_his_AS.
IPR013128. Peptidase_C1A.
IPR000668. Peptidase_C1A_C.
IPR013201. Prot_inhib_I29.
[Graphical view]
PANTHERiPTHR12411. PTHR12411. 1 hit.
PfamiPF08246. Inhibitor_I29. 1 hit.
PF00112. Peptidase_C1. 1 hit.
[Graphical view]
PRINTSiPR00705. PAPAIN.
SMARTiSM00848. Inhibitor_I29. 1 hit.
SM00645. Pept_C1. 1 hit.
[Graphical view]
PROSITEiPS00639. THIOL_PROTEASE_HIS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9SUT0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGSAKSAMLI LLVAMVIASC ATAIDMSVVS YDDNNRLHSV FDAEASLIFE
60 70 80 90 100
SWMVKHGKVY GSVAEKERRL TIFEDNLRFI NNRNAENLSY RLGLTGFADL
110 120 130 140 150
SLHEYKEVCH GADPRPPRNH VFMTSSDRYK TSADDVLPKS VDWRNEGAVT
160 170 180 190 200
EVKDQGHCRS CWAFSTVGAV EGLNKIVTGE LVTLSEQDLI NCNKENNGCG
210 220 230 240 250
GGKLETAYEF IMKNGGLGTD NDYPYKAVNG VCDGRLKENN KNVMIDGYEN
260 270 280 290 300
LPANDESALM KAVAHQPVTA VIDSSSREFQ LYESGVFDGS CGTNLNHGVV
310 320 330 340 350
VVGYGTENGR DYWLVKNSRG ITWGEAGYMK MARNIANPRG LCGIAMRASY
360
PLKNSFSTDK SSIA
Length:364
Mass (Da):39,925
Last modified:May 1, 2000 - v1
Checksum:i5507664B2536F91A
GO

Sequence cautioni

The sequence AAM13065 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.Curated
The sequence AAN15418 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti98A → G in CAA85532 (PubMed:8580968).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL096882 Genomic DNA. Translation: CAB51415.1.
AL161531 Genomic DNA. Translation: CAB81232.1.
CP002687 Genomic DNA. Translation: AEE82995.1.
AY093066 mRNA. Translation: AAM13065.1. Different initiation.
BT000099 mRNA. Translation: AAN15418.1. Different initiation.
Z37253 mRNA. Translation: CAA85532.1.
PIRiT13022.
RefSeqiNP_567376.1. NM_117202.3.
UniGeneiAt.43189.

Genome annotation databases

EnsemblPlantsiAT4G11310.1; AT4G11310.1; AT4G11310.
GeneIDi826733.
GrameneiAT4G11310.1; AT4G11310.1; AT4G11310.
KEGGiath:AT4G11310.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL096882 Genomic DNA. Translation: CAB51415.1.
AL161531 Genomic DNA. Translation: CAB81232.1.
CP002687 Genomic DNA. Translation: AEE82995.1.
AY093066 mRNA. Translation: AAM13065.1. Different initiation.
BT000099 mRNA. Translation: AAN15418.1. Different initiation.
Z37253 mRNA. Translation: CAA85532.1.
PIRiT13022.
RefSeqiNP_567376.1. NM_117202.3.
UniGeneiAt.43189.

3D structure databases

ProteinModelPortaliQ9SUT0.
SMRiQ9SUT0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi12032. 4 interactors.
IntActiQ9SUT0. 3 interactors.
STRINGi3702.AT4G11310.1.

Protein family/group databases

MEROPSiI29.003.

PTM databases

iPTMnetiQ9SUT0.

Proteomic databases

PaxDbiQ9SUT0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT4G11310.1; AT4G11310.1; AT4G11310.
GeneIDi826733.
GrameneiAT4G11310.1; AT4G11310.1; AT4G11310.
KEGGiath:AT4G11310.

Organism-specific databases

TAIRiAT4G11310.

Phylogenomic databases

eggNOGiKOG1543. Eukaryota.
COG4870. LUCA.
HOGENOMiHOG000230773.
InParanoidiQ9SUT0.
OMAiEVCHGAD.
OrthoDBiEOG093613VO.
PhylomeDBiQ9SUT0.

Miscellaneous databases

PROiQ9SUT0.

Gene expression databases

GenevisibleiQ9SUT0. AT.

Family and domain databases

InterProiIPR025660. Pept_his_AS.
IPR013128. Peptidase_C1A.
IPR000668. Peptidase_C1A_C.
IPR013201. Prot_inhib_I29.
[Graphical view]
PANTHERiPTHR12411. PTHR12411. 1 hit.
PfamiPF08246. Inhibitor_I29. 1 hit.
PF00112. Peptidase_C1. 1 hit.
[Graphical view]
PRINTSiPR00705. PAPAIN.
SMARTiSM00848. Inhibitor_I29. 1 hit.
SM00645. Pept_C1. 1 hit.
[Graphical view]
PROSITEiPS00639. THIOL_PROTEASE_HIS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRDL4_ARATH
AccessioniPrimary (citable) accession number: Q9SUT0
Secondary accession number(s): Q42312, Q8RWI3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 30, 2003
Last sequence update: May 1, 2000
Last modified: November 30, 2016
This is version 119 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. Peptidase families
    Classification of peptidase families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.