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Protein

Endoglucanase 20

Gene

At4g23560

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei398By similarity1
Active sitei449By similarity1
Active sitei458By similarity1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidase, Hydrolase
Biological processCarbohydrate metabolism, Cell wall biogenesis/degradation, Cellulose degradation, Polysaccharide degradation

Enzyme and pathway databases

BioCyciARA:AT4G23560-MONOMER

Protein family/group databases

CAZyiGH9 Glycoside Hydrolase Family 9

Names & Taxonomyi

Protein namesi
Recommended name:
Endoglucanase 20 (EC:3.2.1.4)
Alternative name(s):
Endo-1,4-beta glucanase 20
Gene namesi
Ordered Locus Names:At4g23560
ORF Names:F9D16.30
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

AraportiAT4G23560
TAIRilocus:2128394 AT4G23560

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 21Sequence analysisAdd BLAST21
ChainiPRO_000024927222 – 479Endoglucanase 20Add BLAST458

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi29N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi442N-linked (GlcNAc...) asparagineSequence analysis1

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDbiQ9SUS0

Expressioni

Gene expression databases

ExpressionAtlasiQ9SUS0 baseline and differential
GenevisibleiQ9SUS0 AT

Interactioni

Protein-protein interaction databases

BioGridi13745, 1 interactor
STRINGi3702.AT4G23560.1

Structurei

3D structure databases

ProteinModelPortaliQ9SUS0
SMRiQ9SUS0
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG410IHSN Eukaryota
ENOG410ZZU6 LUCA
HOGENOMiHOG000021033
InParanoidiQ9SUS0
OMAiSQRVKWR
OrthoDBiEOG093609RT
PhylomeDBiQ9SUS0

Family and domain databases

Gene3Di1.50.10.10, 1 hit
InterProiView protein in InterPro
IPR008928 6-hairpin_glycosidase_sf
IPR012341 6hp_glycosidase-like_sf
IPR001701 Glyco_hydro_9
IPR033126 Glyco_hydro_9_Asp/Glu_AS
IPR018221 Glyco_hydro_9_His_AS
PfamiView protein in Pfam
PF00759 Glyco_hydro_9, 1 hit
SUPFAMiSSF48208 SSF48208, 1 hit
PROSITEiView protein in PROSITE
PS00592 GLYCOSYL_HYDROL_F9_1, 1 hit
PS00698 GLYCOSYL_HYDROL_F9_2, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9SUS0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKLLVLMLV GMFLAFESLE ALEYGDALNK SILFFEGQRS GKLPTNQRVK
60 70 80 90 100
WRADSALSDG SLANVNLIGG YYDAGDNVKF VWPMSFTTTL LSWAAIEYQN
110 120 130 140 150
EISSVNQLGY LRSTIKWGTD FILRAHTSPN MLYTQVGDGN SDHSCWERPE
160 170 180 190 200
DMDTSRTLYS ISSSSPGSEA AGEAAAALAA ASLVFKSVDS TYSSTLLNHA
210 220 230 240 250
KTLFEFADKY RGSYQASCPF YCSYSGYQDE LLWAAAWLYK ATGDKIYINY
260 270 280 290 300
VISNKDWSQA VNEFSWDNKF VGAQALLVSE FYNGANDLAK FKSDVESFVC
310 320 330 340 350
AMMPGSSSQQ IKPTPGGLLF IRDSSNLQYV TTATTVLFHY SKTLTKAGVG
360 370 380 390 400
SIQCGSTKFT VSQIRNFAKS QVDYILGNNP MKMSYMVGFG TKYPTQPHHR
410 420 430 440 450
GSSLPSIQSK PEKIDCNGGY SYYNSDTPNP NVHIGAIVGG PNSSDQYSDK
460 470
KSDYSHAEPT TYINAAFIGP VAALISSSG
Length:479
Mass (Da):52,450
Last modified:May 1, 2000 - v1
Checksum:i058C98C096A0A07F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL035394 Genomic DNA Translation: CAA23022.1
AL161559 Genomic DNA Translation: CAB79311.1
CP002687 Genomic DNA Translation: AEE84775.1
PIRiT05588
RefSeqiNP_194087.1, NM_118487.4
UniGeneiAt.23383
At.5403

Genome annotation databases

EnsemblPlantsiAT4G23560.1; AT4G23560.1; AT4G23560
GeneIDi828456
GrameneiAT4G23560.1; AT4G23560.1; AT4G23560
KEGGiath:AT4G23560

Similar proteinsi

Entry informationi

Entry nameiGUN20_ARATH
AccessioniPrimary (citable) accession number: Q9SUS0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 5, 2006
Last sequence update: May 1, 2000
Last modified: April 25, 2018
This is version 110 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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