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Q9SU38 (Q9SU38_ARATH) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 84. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Putative adenine phosphoribosyltransferase EMBL CAB41714.1
Gene names
Name:AT4g12440 EMBL CAB41714.1
Synonyms:APT4 EMBL AEE83133.1
Ordered Locus Names:At4g12440 TAIR At4g12440
ORF Names:AT4G12440 EMBL AEE83133.1
OrganismArabidopsis thaliana (Mouse-ear cress) EMBL CAB41714.1
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsrosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length182 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q9SU38 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 976CA5085032935B

FASTA18220,355
        10         20         30         40         50         60 
MSENEVKDPR IDGIKTKIRV VPDFPKKGIM FQDITTLLLD PKAFKDTIDL FVERYRDMNI 

        70         80         90        100        110        120 
SVVAGIEARG FIFGSPIALA IGAKFVPLRK PKKLPGQIIF EEYELEYGSD RLEMHVEAVD 

       130        140        150        160        170        180 
SGDRALVVDD LIATGGTLCA AMNLLKRVGA EVIECACVIE LPELKGRERL EGKPLYVLVE 


YR 

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References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana."
EU, CSHL and WU Arabidopsis Sequencing Project
Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M., de Simone V., Obermaier B. expand/collapse author list , Mache R., Mueller M., Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D., Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B., Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J., Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J., Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M., Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R., Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K., Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M., Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K., Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W., Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A., Martienssen R., McCombie W.R.
Nature 402:769-777(1999) [PubMed: 10617198] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]EU Arabidopsis sequencing project
Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]"Arabidopsis Open Reading Frame (ORF) Clones."
Yamada K., Chan M.M., Chang C.H., Dale J.M., Deng J.M., Hsuan V.W., Lee J.M., Quach H.L., Tang C.C., Toriumi M., Wu H.C., Yu G., Bowser L., Chen H., Cheuk R., Jones T., Karlin-Neumann G., Kim C. expand/collapse author list , Lam B., Lin J., Miranda M., Nguyen M., Palm C.J., Shinn P., Southwick A., Davis R.W., Ecker J.R., Theologis A.
Submitted (JUL-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[4]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[5]Peters S.A., van Staveren M., Dirkse W., Stiekema W., Mewes H.W., Lemcke K., Mayer K.F.X.
Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AY133689 mRNA. Translation: AAM91623.1.
CP002687 Genomic DNA. Translation: AEE83133.1.
AL049730 Genomic DNA. Translation: CAB41714.1.
AL161534 Genomic DNA. Translation: CAB78287.1.
IPIIPI00546006.
PIRT07636.
RefSeqNP_192981.1. NM_117314.2.
UniGeneAt.33474.

3D structure databases

HSSPHSSP built from PDB template 1G2Q based on UniProtKB P49435.
ProteinModelPortalQ9SU38.
SMRQ9SU38. Positions 7-182.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ9SU38.

Proteomic databases

PRIDEQ9SU38.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT4G12440.2; AT4G12440.2; AT4G12440.
GeneID826856.
KEGGath:AT4G12440.
NMPDRfig|3702.1.peg.18919.

Organism-specific databases

TAIRAt4g12440.

Phylogenomic databases

GeneTreeEPGT00050000006146.
InParanoidQ9SU38.
OMAILECLVV.
PhylomeDBQ9SU38.
ProtClustDBPLN02293.

Enzyme and pathway databases

BRENDA2.4.2.7. 302.

Gene expression databases

GenevestigatorQ9SU38.

Family and domain databases

HAMAPMF_00004. Aden_phosphoribosyltr.
[Tree]
InterProIPR005764. Ade_phspho_trans.
IPR000836. PRibTrfase.
[Graphical view]
KOK00759.
PfamPF00156. Pribosyltran. 1 hit.
[Graphical view]
TIGRFAMsTIGR01090. Apt. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ9SU38_ARATH
AccessionPrimary (citable) accession number: Q9SU38
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: January 25, 2012
This is version 84 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)