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Unreviewed, UniProtKB/TrEMBL Q9STV1 (Q9STV1_ARATH)

Last modified April 14, 2009. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    LG27/30-like gene EMBL CAB45078.1
Gene names
Name: T22A6.260 EMBL CAB45078.1
Synonyms: AT4g24430 EMBL CAB79353.1
OrganismArabidopsis thaliana (Mouse-ear cress) EMBL CAB45078.1
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsrosidseurosids IIBrassicalesBrassicaceaeArabidopsis

Protein attributes

Sequence length646 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

Ontologies

Gene Ontology (GO)
   Molecular functioncarbohydrate binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9STV1-1 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: B5ACAD2021EAE0C3

FASTA64673,609
        10         20         30         40         50         60 
MSNQDSVQLD VQESHVVMGN GKVKVTISKP DGFVTGISYQ GVDNLLETHN EDFNRGYWDL 

        70         80         90        100        110        120 
VWSDEGTPGT TGKSERIKGT SFEVVVENEE LVEISFSRKW DSSLQDSIAP INVDKRFIMR 

       130        140        150        160        170        180 
KDVTGFYSYA IFEHLAEWPA FNLPQTRIVY KLRKDKFKYM AIADNRQRKM PLPEDRLGKR 

       190        200        210        220        230        240 
GRPLAYPEAV LLVHPVEDEF KGEVDDKYEY SSENKDLKVH GWISHNLDLG CWQIIPSNEF 

       250        260        270        280        290        300 
RSGGLSKQNL TSHVGPISLA MFLSAHYAGE DMVMKVKAGD SWKKVFGPVF TYLNCLPDKT 

       310        320        330        340        350        360 
SDPLSLWQDA KNQMLTEVQS WPYDFPASED FPVSDKRGCI SGRLLVCDKF LSDDFLPANG 

       370        380        390        400        410        420 
AFVGLAPPGE VGSWQLESKG YQFWTEADSD GYFAINDIRE GEYNLNGYVT GWIGDYQYEQ 

       430        440        450        460        470        480 
LINITAGCDI DVGNIVYEPP RDGPTVWEIG IPDRSAAEFF VPDPNPKYIN KLYIGHPDRF 

       490        500        510        520        530        540 
RQYGLWERYT ELYPKEDLVF TIGVSDYKKD WFFAHVTRKM GDDTYQKTTW QIKFKLENVQ 

       550        560        570        580        590        600 
KSCTYKIRIA LATANVAELQ VRMNDDDTEK TTPIFTTGVI GHDNAIARHG IHGIYRLYNV 

       610        620        630        640 
DVPSEKLVEG DNTLFLTQTM TTTGAFNGLM YDYIRLEGPP LDSYSH 

« Hide

References

[1]Bevan M., Zimmermann W., Grueneisen A., Wambutt R., Bancroft I., Mewes H.W., Mayer K.F.X., Lemcke K., Schueller C.
Submitted (JUN-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]EU Arabidopsis sequencing project
Submitted (JUN-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]Zimmermann W., Grueneisen A., Wambutt R., Kalicki J., Wohldmann P., Smith A., Mewes H.W., Lemcke K., Mayer K.F.X.
Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[4]EU Arabidopsis sequencing project
Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

AL078637 Genomic DNA. Translation: CAB45078.1.
AL161561 Genomic DNA. Translation: CAB79353.1.
IPIIPI00533871.
PIRT09906.

3D structure databases

ModBaseSearch...

Protein family/group databases

CAZyPL4. Polysaccharide Lyase Family 4.

Gene expression databases

ArrayExpressQ9STV1.

Family and domain databases

InterProIPR010325. Rhamnogal_lyase.
[Graphical view]
PfamPF06045. Rhamnogal_lyase. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9STV1_ARATH
AccessionPrimary (citable) accession number: Q9STV1
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: April 14, 2009
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information