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Q9STC1

- Q9STC1_9FLOR

UniProt

Q9STC1 - Q9STC1_9FLOR

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Protein
Submitted name:

Alpha-1,4-glucan lyase isozyme 1

Gene
Ag111
Organism
Gracilariopsis lemaneiformis
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei295 – 2951Acetate 1Imported
Binding sitei526 – 5261Acetate 2Imported
Binding sitei605 – 6051ChlorideImported
Binding sitei699 – 6991ChlorideImported
Binding sitei895 – 8951Acetate 3Imported
Binding sitei922 – 9221Acetate 3; via amide nitrogenImported
Binding sitei1036 – 10361Acetate 4; via carbonyl oxygenImported

GO - Molecular functioni

  1. carbohydrate binding Source: InterPro
  2. exo-(1,4)-alpha-D-glucan lyase activity Source: UniProtKB-EC
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Protein family/group databases

CAZyiGH31. Glycoside Hydrolase Family 31.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-1,4-glucan lyase isozyme 1Imported (EC:4.2.2.13Imported)
Gene namesi
Name:Ag111Imported
OrganismiGracilariopsis lemaneiformisImported
Taxonomic identifieri2782 [NCBI]
Taxonomic lineageiEukaryotaRhodophytaFlorideophyceaeGracilarialesGracilariaceaeGracilariopsis

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei‹1 – 50›50 PredictedImportedAdd
BLAST
Chaini51 – 10881038 PredictedImportedPRO_5000147347Add
BLAST

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2X2HX-ray2.06A/B/C/D62-1088[»]
2X2IX-ray2.60A/B/C/D62-1088[»]
2X2JX-ray2.35A/B/C/D62-1088[»]
4AMWX-ray1.90A/B/C/D62-1088[»]
4AMXX-ray2.10A/B/C/D62-1088[»]

Miscellaneous databases

EvolutionaryTraceiQ9STC1.

Family & Domainsi

Keywords - Domaini

SignalImported

Family and domain databases

InterProiIPR011013. Gal_mutarotase_SF_dom.
IPR000322. Glyco_hydro_31.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF01055. Glyco_hydro_31. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
SSF74650. SSF74650. 1 hit.

Sequencei

Sequence statusi: Fragment.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9STC1-1 [UniParc]FASTAAdd to Basket

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MFSTLAFVAP SALGASTFVG AEVRSNVRIH SAFPAVHTAT RKTNRLNVSM     50
TALSDKQTAT AGSTDNPDGI DYKTYDYVGV WGFSPLSNTN WFAAGSSTPG 100
GITDWTATMN VNFDRIDNPS ITVQHPVQVQ VTSYNNNSYR VRFNPDGPIR 150
DVTRGPILKQ QLDWIRTQEL SEGCDPGMTF TSEGFLTFET KDLSVIIYGN 200
FKTRVTRKSD GKVIMENDEV GTASSGNKCR GLMFVDRLYG NAIASVNKNF 250
RNDAVKQEGF YGAGEVNCKY QDTYILERTG IAMTNYNYDN LNYNQWDLRP 300
PHHDGALNPD YYIPMYYAAP WLIVNGCAGT SEQYSYGWFM DNVSQSYMNT 350
GDTTWNSGQE DLAYMGAQYG PFDQHFVYGA GGGMECVVTA FSLLQGKEFE 400
NQVLNKRSVM PPKYVFGFFQ GVFGTSSLLR AHMPAGENNI SVEEIVEGYQ 450
NNNFPFEGLA VDVDMQDNLR VFTTKGEFWT ANRVGTGGDP NNRSVFEWAH 500
DKGLVCQTNI TCFLRNDNEG QDYEVNQTLR ERQLYTKNDS LTGTDFGMTD 550
DGPSDAYIGH LDYGGGVECD ALFPDWGRPD VAEWWGNNYK KLFSIGLDFV 600
WQDMTVPAMM PHKIGDDINV KPDGNWPNAD DPSNGQYNWK TYHPQVLVTD 650
MRYENHGREP MVTQRNIHAY TLCESTRKEG IVENADTLTK FRRSYIISRG 700
GYIGNQHFGG MWVGDNSTTS NYIQMMIANN INMNMSCLPL VGSDIGGFTS 750
YDNENQRTPC TGDLMVRYVQ AGCLLPWFRN HYDRWIESKD HGKDYQELYM 800
YPNEMDTLRK FVEFRYRWQE VLYTAMYQNA AFGKPIIKAA SMYNNDSNVR 850
RAQNDHFLLG GHDGYRILCA PVVWENSTER ELYLPVLTQW YKFGPDFDTK 900
PLEGAMNGGD RIYNYPVPQS ESPIFVREGA ILPTRYTLNG ENKSLNTYTD 950
EDPLVFEVFP LGNNRADGMC YLDDGGVTTN AEDNGKFSVV KVAAEQDGGT 1000
ETITFTNDCY EYVFGGPFYV RVRGAQSPSN IHVSSGAGSQ DMKVSSATSR 1050
AALFNDGENG DFWVDQETDS LWLKLPNVVL PDAVITIT 1088
Length:1,088
Mass (Da):122,338
Last modified:May 1, 2000 - v1
Checksum:iAFA40991350ABEFA
GO

Non-terminal residue

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Y18737 Genomic DNA. Translation: CAB51910.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Y18737 Genomic DNA. Translation: CAB51910.1 .

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
2X2H X-ray 2.06 A/B/C/D 62-1088 [» ]
2X2I X-ray 2.60 A/B/C/D 62-1088 [» ]
2X2J X-ray 2.35 A/B/C/D 62-1088 [» ]
4AMW X-ray 1.90 A/B/C/D 62-1088 [» ]
4AMX X-ray 2.10 A/B/C/D 62-1088 [» ]
ModBasei Search...
MobiDBi Search...

Protein family/group databases

CAZyi GH31. Glycoside Hydrolase Family 31.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Miscellaneous databases

EvolutionaryTracei Q9STC1.

Family and domain databases

InterProi IPR011013. Gal_mutarotase_SF_dom.
IPR000322. Glyco_hydro_31.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
Pfami PF01055. Glyco_hydro_31. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 2 hits.
SSF74650. SSF74650. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "A group of alpha-1,4-glucan lyases and their genes from the red alga Gracilariopsis lemaneiformis: purification, cloning, and heterologous expression."
    Bojsen K., Yu S., Kragh K.M., Marcussen J.
    Biochim. Biophys. Acta 1430:396-402(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  2. "Crystal structure of ?-1,4-glucan lyase, a unique glycoside hydrolase family member with a novel catalytic mechanism."
    Rozeboom H.J., Yu S., Madrid S., Kalk K.H., Zhang R., Dijkstra B.W.
    J. Biol. Chem. 288:26764-26774(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.90 ANGSTROMS) OF 62-1088.

Entry informationi

Entry nameiQ9STC1_9FLOR
AccessioniPrimary (citable) accession number: Q9STC1
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: September 3, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported

External Data

Dasty 3

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