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Q9STC1

- Q9STC1_9FLOR

UniProt

Q9STC1 - Q9STC1_9FLOR

Protein
Submitted name:

Alpha-1,4-glucan lyase isozyme 1

Gene

Ag111

Organism
Gracilariopsis lemaneiformis
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 42 (01 Oct 2014)
      Sequence version 1 (01 May 2000)
      Previous versions | rss
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    Functioni

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei295 – 2951Acetate 1Imported
    Binding sitei526 – 5261Acetate 2Imported
    Binding sitei605 – 6051ChlorideImported
    Binding sitei699 – 6991ChlorideImported
    Binding sitei895 – 8951Acetate 3Imported
    Binding sitei922 – 9221Acetate 3; via amide nitrogenImported
    Binding sitei1036 – 10361Acetate 4; via carbonyl oxygenImported

    GO - Molecular functioni

    1. carbohydrate binding Source: InterPro
    2. exo-(1,4)-alpha-D-glucan lyase activity Source: UniProtKB-EC
    3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    GlycosidaseUniRule annotation, Hydrolase, LyaseImported

    Protein family/group databases

    CAZyiGH31. Glycoside Hydrolase Family 31.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha-1,4-glucan lyase isozyme 1Imported (EC:4.2.2.13Imported)
    Gene namesi
    Name:Ag111Imported
    OrganismiGracilariopsis lemaneiformisImported
    Taxonomic identifieri2782 [NCBI]
    Taxonomic lineageiEukaryotaRhodophytaFlorideophyceaeGracilarialesGracilariaceaeGracilariopsis

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei‹1 – 50›50 PotentialImportedAdd
    BLAST
    Chaini51 – 10881038 PotentialImportedPRO_5000147347Add
    BLAST

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    2X2HX-ray2.06A/B/C/D62-1088[»]
    2X2IX-ray2.60A/B/C/D62-1088[»]
    2X2JX-ray2.35A/B/C/D62-1088[»]
    4AMWX-ray1.90A/B/C/D62-1088[»]
    4AMXX-ray2.10A/B/C/D62-1088[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiQ9STC1.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 31 family.UniRule annotation

    Keywords - Domaini

    SignalImported

    Family and domain databases

    InterProiIPR011013. Gal_mutarotase_SF_dom.
    IPR000322. Glyco_hydro_31.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PfamiPF01055. Glyco_hydro_31. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 2 hits.
    SSF74650. SSF74650. 1 hit.

    Sequencei

    Sequence statusi: Fragment.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q9STC1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MFSTLAFVAP SALGASTFVG AEVRSNVRIH SAFPAVHTAT RKTNRLNVSM     50
    TALSDKQTAT AGSTDNPDGI DYKTYDYVGV WGFSPLSNTN WFAAGSSTPG 100
    GITDWTATMN VNFDRIDNPS ITVQHPVQVQ VTSYNNNSYR VRFNPDGPIR 150
    DVTRGPILKQ QLDWIRTQEL SEGCDPGMTF TSEGFLTFET KDLSVIIYGN 200
    FKTRVTRKSD GKVIMENDEV GTASSGNKCR GLMFVDRLYG NAIASVNKNF 250
    RNDAVKQEGF YGAGEVNCKY QDTYILERTG IAMTNYNYDN LNYNQWDLRP 300
    PHHDGALNPD YYIPMYYAAP WLIVNGCAGT SEQYSYGWFM DNVSQSYMNT 350
    GDTTWNSGQE DLAYMGAQYG PFDQHFVYGA GGGMECVVTA FSLLQGKEFE 400
    NQVLNKRSVM PPKYVFGFFQ GVFGTSSLLR AHMPAGENNI SVEEIVEGYQ 450
    NNNFPFEGLA VDVDMQDNLR VFTTKGEFWT ANRVGTGGDP NNRSVFEWAH 500
    DKGLVCQTNI TCFLRNDNEG QDYEVNQTLR ERQLYTKNDS LTGTDFGMTD 550
    DGPSDAYIGH LDYGGGVECD ALFPDWGRPD VAEWWGNNYK KLFSIGLDFV 600
    WQDMTVPAMM PHKIGDDINV KPDGNWPNAD DPSNGQYNWK TYHPQVLVTD 650
    MRYENHGREP MVTQRNIHAY TLCESTRKEG IVENADTLTK FRRSYIISRG 700
    GYIGNQHFGG MWVGDNSTTS NYIQMMIANN INMNMSCLPL VGSDIGGFTS 750
    YDNENQRTPC TGDLMVRYVQ AGCLLPWFRN HYDRWIESKD HGKDYQELYM 800
    YPNEMDTLRK FVEFRYRWQE VLYTAMYQNA AFGKPIIKAA SMYNNDSNVR 850
    RAQNDHFLLG GHDGYRILCA PVVWENSTER ELYLPVLTQW YKFGPDFDTK 900
    PLEGAMNGGD RIYNYPVPQS ESPIFVREGA ILPTRYTLNG ENKSLNTYTD 950
    EDPLVFEVFP LGNNRADGMC YLDDGGVTTN AEDNGKFSVV KVAAEQDGGT 1000
    ETITFTNDCY EYVFGGPFYV RVRGAQSPSN IHVSSGAGSQ DMKVSSATSR 1050
    AALFNDGENG DFWVDQETDS LWLKLPNVVL PDAVITIT 1088
    Length:1,088
    Mass (Da):122,338
    Last modified:May 1, 2000 - v1
    Checksum:iAFA40991350ABEFA
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Y18737 Genomic DNA. Translation: CAB51910.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Y18737 Genomic DNA. Translation: CAB51910.1 .

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    2X2H X-ray 2.06 A/B/C/D 62-1088 [» ]
    2X2I X-ray 2.60 A/B/C/D 62-1088 [» ]
    2X2J X-ray 2.35 A/B/C/D 62-1088 [» ]
    4AMW X-ray 1.90 A/B/C/D 62-1088 [» ]
    4AMX X-ray 2.10 A/B/C/D 62-1088 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    CAZyi GH31. Glycoside Hydrolase Family 31.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Miscellaneous databases

    EvolutionaryTracei Q9STC1.

    Family and domain databases

    InterProi IPR011013. Gal_mutarotase_SF_dom.
    IPR000322. Glyco_hydro_31.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    Pfami PF01055. Glyco_hydro_31. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 2 hits.
    SSF74650. SSF74650. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "A group of alpha-1,4-glucan lyases and their genes from the red alga Gracilariopsis lemaneiformis: purification, cloning, and heterologous expression."
      Bojsen K., Yu S., Kragh K.M., Marcussen J.
      Biochim. Biophys. Acta 1430:396-402(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
    2. "Crystal structure of ?-1,4-glucan lyase, a unique glycoside hydrolase family member with a novel catalytic mechanism."
      Rozeboom H.J., Yu S., Madrid S., Kalk K.H., Zhang R., Dijkstra B.W.
      J. Biol. Chem. 288:26764-26774(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (1.90 ANGSTROMS) OF 62-1088.

    Entry informationi

    Entry nameiQ9STC1_9FLOR
    AccessioniPrimary (citable) accession number: Q9STC1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 1, 2000
    Last sequence update: May 1, 2000
    Last modified: October 1, 2014
    This is version 42 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported

    External Data

    Dasty 3