Probable glycosyltransferase At3g07620 - Arabidopsis thaliana (Mouse-ear cress)

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Q9SSE8 (GLYT1_ARATH) Reviewed, UniProtKB/Swiss-Prot

Last modified December 14, 2011. Version 47. History...

Clusters with 100%, 90%, 50% identity |

Documents (2) |

Third-party data

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Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents Customize order

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Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents Customize order

Names and origin

Protein names

Recommended name:
Probable glycosyltransferase At3g07620
EC=2.4.-.-

Gene names

Ordered Locus Names:	At3g07620
ORF Names:	MLP3.7

Organism

Arabidopsis thaliana (Mouse-ear cress)

Taxonomic identifier

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	470 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	May be involved in cell wall biosynthesis.
Subcellular location	Golgi apparatus membrane; Single-pass type II membrane protein By similarity.
Sequence similarities	Belongs to the glycosyltransferase 47 family.

Ontologies

Keywords
Biological process	Cell wall biogenesis/degradation
Cellular component	Golgi apparatus Membrane
Domain	Signal-anchor Transmembrane Transmembrane helix
Molecular function	Glycosyltransferase Transferase
PTM	Glycoprotein
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	cellular cell wall organization Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	Golgi membrane Inferred from electronic annotation. Source: UniProtKB-SubCell integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	transferase activity, transferring glycosyl groups Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Chain

470

Probable glycosyltransferase At3g07620

PRO_0000392292

Regions

Topological domain

7

Cytoplasmic Potential

Transmembrane

21

Helical; Signal-anchor; Potential

Topological domain

442

Lumenal Potential

Amino acid modifications

Glycosylation

1

N-linked (GlcNAc...) Potential

Glycosylation

1

N-linked (GlcNAc...) Potential

Glycosylation

1

N-linked (GlcNAc...) Potential

Glycosylation

1

N-linked (GlcNAc...) Potential

Glycosylation

1

N-linked (GlcNAc...) Potential

Glycosylation

1

N-linked (GlcNAc...) Potential

Sequences

Sequence

Length

Mass (Da)

Tools

Q9SSE8 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 36BF031618A830A3
Show »

470

54,691

        10         20         30         40         50         60 
MRDYIPKYLN AFLLAFATFA VGFAIFIAKD SNSSSHLYFS TSSSLWTSSF SPAFITVSIF 

        70         80         90        100        110        120 
LTVHRFREKR KRNGSNPGSG YWKRDGKVEA ELATARVLIR EAQLNYSSTT SSPLGDEDYV 

       130        140        150        160        170        180 
PHGDIYRNPY AFHRSYLLME KMFKIYVYEE GDPPIFHYGL CKDIYSMEGL FLNFMENDVL 

       190        200        210        220        230        240 
KYRTRDPDKA HVYFLPFSVV MILHHLFDPV VRDKAVLERV IADYVQIISK KYPYWNTSDG 

       250        260        270        280        290        300 
FDHFMLSCHD WGHRATWYVK KLFFNSIRVL CNANISEYFN PEKDAPFPEI NLLTGDINNL 

       310        320        330        340        350        360 
TGGLDPISRT TLAFFAGKSH GKIRPVLLNH WKEKDKDILV YENLPDGLDY TEMMRKSRFC 

       370        380        390        400        410        420 
ICPSGHEVAS PRVPEAIYSG CVPVLISENY VLPFSDVLNW EKFSVSVSVK EIPELKRILM 

       430        440        450        460        470 
DIPEERYMRL YEGVKKVKRH ILVNDPPKRY DVFNMIIHSI WLRRLNVKLL

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana." Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B., Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N., Artiguenave F. Tabata S. Nature 408:820-822(2000) [PubMed: 11130713] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Columbia.
[3]	"Identification of a xylogalacturonan xylosyltransferase involved in pectin biosynthesis in Arabidopsis." Jensen J.K., Sorensen S.O., Harholt J., Geshi N., Sakuragi Y., Moller I., Zandleven J., Bernal A.J., Jensen N.B., Sorensen C., Pauly M., Beldman G., Willats W.G., Scheller H.V. Plant Cell 20:1289-1302(2008) [PubMed: 18460606] [Abstract] Cited for: IDENTIFICATION.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AC009176 Genomic DNA. Translation: AAF13080.1. CP002686 Genomic DNA. Translation: AEE74576.1.
IPI	IPI00525688.
RefSeq	NP_187419.1. NM_111641.1.
UniGene	At.53216.
3D structure databases
ProteinModelPortal	Q9SSE8.
ModBase	Search...
Protein family/group databases
CAZy	GT47. Glycosyltransferase Family 47.
Proteomic databases
PRIDE	Q9SSE8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	AT3G07620.1; AT3G07620.1; AT3G07620.
GeneID	819953.
GenomeReviews	Gene locus AT3G07620 in contig BA000014_GR.
KEGG	ath:AT3G07620.
NMPDR	fig\|3702.1.peg.12793.
Organism-specific databases
TAIR	At3g07620.
Phylogenomic databases
eggNOG	KOG1021.
GeneTree	EPGT00070000028243.
HOGENOM	HBG744139.
InParanoid	Q9SSE8.
OMA	ICPSGHE.
PhylomeDB	Q9SSE8.
ProtClustDB	CLSN2915528.
Gene expression databases
Genevestigator	Q9SSE8.
Family and domain databases
InterPro	IPR004263. Exostosin. [Graphical view]
Pfam	PF03016. Exostosin. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

GLYT1_ARATH

Accession

Primary (citable) accession number: Q9SSE8

Entry history

Integrated into UniProtKB/Swiss-Prot:	March 23, 2010
Last sequence update:	May 1, 2000
Last modified:	December 14, 2011
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Plant Protein Annotation Program

Relevant documents

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names

SIMILARITY comments

Index of protein domains and families

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Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents