Q9SSC7 (LOR5_ARATH) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Protein LURP-one-related 5

Gene names

Ordered Locus Names:	At1g80120
ORF Names:	F18B13.20

Organism

Arabidopsis thaliana (Mouse-ear cress)

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	210 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Function	Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors By similarity.
Sequence similarities	Belongs to the LOR family.

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Binary interactions

With	Entry	#Exp.	IntAct	Notes
CAM1	P25854	1	EBI-1238625,EBI-1235664
CAM6	Q03509	1	EBI-1238625,EBI-1236097
CAM7	P59220	1	EBI-1238625,EBI-1236031
CML10	P30187	1	EBI-1238625,EBI-1238722
CML9	Q9S744	1	EBI-1238625,EBI-1236048

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 210	210	Protein LURP-one-related 5		PRO_0000399237

Sequences

	Sequence		Length	Mass (Da)
	Q9SSC7 [UniParc]. Last modified May 1, 2000. Version 1. Checksum: C53A56A641E538D8	FASTA	210	23,454
	10 20 30 40 50 60 MKGGLLVDDE FIHGEERSLT VRKTSLFFAG DGFTVYDCKG SLVFRVDSYG GPNTRDTDEV 70 80 90 100 110 120 VLMDAHGRCL LTLRRKRPSL RRRWEGYLGE RSDGQKPIFG VRRSSIIGRN SVTVEVYGDY 130 140 150 160 170 180 QCSEYLIEGS FGARNCTVVE AETRRKVAEI RRKVDASTNV MLGKDVFSLN VKPGFDGAFA 190 200 210 MGLVLVLDQI YGDDLLEVGE EQVHPSAEDL

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana." Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K. , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W. Nature 408:816-820(2000) [PubMed: 11130712] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[2]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Columbia.
[3]	"Empirical analysis of transcriptional activity in the Arabidopsis genome." Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R. Science 302:842-846(2003) [PubMed: 14593172] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: cv. Columbia.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AC009322 Genomic DNA. Translation: AAD55470.1. CP002684 Genomic DNA. Translation: AEE36359.1. BT004042 mRNA. Translation: AAO42075.1. BT005160 mRNA. Translation: AAO50693.1.
IPI	IPI00516533.
PIR	G96832.
RefSeq	NP_178129.1. NM_106661.2.
UniGene	At.33977.
3D structure databases
ProteinModelPortal	Q9SSC7.
SMR	Q9SSC7. Positions 3-192.
ModBase	Search...
Protein-protein interaction databases
IntAct	Q9SSC7. 5 interactions.
Proteomic databases
PRIDE	Q9SSC7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	AT1G80120.1; AT1G80120.1; AT1G80120.
GeneID	844352.
GenomeReviews	Gene locus AT1G80120 in contig CT485782_GR.
KEGG	ath:AT1G80120.
NMPDR	fig|3702.1.peg.7597.
Organism-specific databases
TAIR	At1g80120.
Phylogenomic databases
GeneTree	EPGT00050000007171.
HOGENOM	HBG588973.
InParanoid	Q9SSC7.
OMA	AFRVETY.
PhylomeDB	Q9SSC7.
ProtClustDB	CLSN2681889.
Gene expression databases
Genevestigator	Q9SSC7.
Family and domain databases
InterPro	IPR007612. DUF567. IPR000007. Tubby_C. [Graphical view]
Pfam	PF04525. DUF567. 1 hit. [Graphical view]
SUPFAM	SSF54518. Tubby_C. 1 hit.
ProtoNet	Search...

Entry information

Entry name

LOR5_ARATH

Accession

Primary (citable) accession number: Q9SSC7

Entry history

Integrated into UniProtKB/Swiss-Prot:	October 5, 2010
Last sequence update:	May 1, 2000
Last modified:	December 14, 2011
This is version 54 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Plant Protein Annotation Program