Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

F18B13.21 protein

Gene

F18B13.21

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

  • response to oxidative stress Source: TAIR

Names & Taxonomyi

Protein namesi
Submitted name:
F18B13.21 proteinImported
Submitted name:
Putative uncharacterized proteinImported
Submitted name:
Putative uncharacterized protein At1g80130Imported
Submitted name:
Tetratricopeptide repeat domain-containing proteinImported
Gene namesi
Name:F18B13.21Imported
Ordered Locus Names:At1g80130Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

TAIRilocus:2016229. AT1G80130.

Subcellular locationi

GO - Cellular componenti

  • membrane Source: TAIR

Interactioni

Protein-protein interaction databases

STRINGi3702.AT1G80130.1.

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410J1VJ. Eukaryota.
ENOG410YSIR. LUCA.
HOGENOMiHOG000029161.
OMAiQHTSITA.
OrthoDBiEOG09360K6N.

Family and domain databases

Gene3Di1.25.40.10. 1 hit.
InterProiView protein in InterPro
IPR011990. TPR-like_helical_dom.
SUPFAMiSSF48452. SSF48452. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9SSC6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLLRSTSAPI LNSWLPQHCS RESSPEPESQ LWRRSTSLSL FSSKSIDGHT
60 70 80 90 100
GEQLHQALSD NKEIIILKSK SNEHSYKTPT SSRQRRSSLD ETRYTKKTLD
110 120 130 140 150
RSSPFLVERL FSSSGQGDKA SSNDRLETLV SGGGGGMGGS GGNICNGGGG
160 170 180 190 200
VGGSGVDGGR SEDATDTYYR EMIDSNPGNS LLTGNYAKFL KEVKGDMKKA
210 220 230 240 250
EEYCERAILG NTNDGNVLSL YADLILHNHQ DRQRAHSYYK QAVKMSPEDC
260 270 280 290 300
YVQASYARFL WDVDEDEEDE ALGEEEENLS DETGHVPPTT MFRDFPQHTS

ITASS
Length:305
Mass (Da):33,595
Last modified:May 1, 2000 - v1
Checksum:i6C19DDCC6646A715
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC009322 Genomic DNA. Translation: AAD55471.1.
AY034991 mRNA. Translation: AAK59496.1.
AY063018 mRNA. Translation: AAL34192.1.
AY087456 mRNA. Translation: AAM65002.1.
CP002684 Genomic DNA. Translation: AEE36360.1.
PIRiH96832.
RefSeqiNP_565230.1. NM_106662.5.
UniGeneiAt.23459.

Genome annotation databases

EnsemblPlantsiAT1G80130.1; AT1G80130.1; AT1G80130.
GeneIDi844353.
GrameneiAT1G80130.1; AT1G80130.1; AT1G80130.
KEGGiath:AT1G80130.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC009322 Genomic DNA. Translation: AAD55471.1.
AY034991 mRNA. Translation: AAK59496.1.
AY063018 mRNA. Translation: AAL34192.1.
AY087456 mRNA. Translation: AAM65002.1.
CP002684 Genomic DNA. Translation: AEE36360.1.
PIRiH96832.
RefSeqiNP_565230.1. NM_106662.5.
UniGeneiAt.23459.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT1G80130.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G80130.1; AT1G80130.1; AT1G80130.
GeneIDi844353.
GrameneiAT1G80130.1; AT1G80130.1; AT1G80130.
KEGGiath:AT1G80130.

Organism-specific databases

AraportiAT1G80130.
TAIRilocus:2016229. AT1G80130.

Phylogenomic databases

eggNOGiENOG410J1VJ. Eukaryota.
ENOG410YSIR. LUCA.
HOGENOMiHOG000029161.
OMAiQHTSITA.
OrthoDBiEOG09360K6N.

Family and domain databases

Gene3Di1.25.40.10. 1 hit.
InterProiView protein in InterPro
IPR011990. TPR-like_helical_dom.
SUPFAMiSSF48452. SSF48452. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ9SSC6_ARATH
AccessioniPrimary (citable) accession number: Q9SSC6
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: February 15, 2017
This is version 100 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.