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Unreviewed, UniProtKB/TrEMBL Q9SS93 (Q9SS93_ARATH)

Last modified April 14, 2009. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    F4P13.16 protein EMBL AAF01546.1
Submitted name:
    Putative uncharacterized protein At3g01620 EMBL AAO42415.1
Gene names
Ordered Locus Names: At3g01620 TAIR At3g01620
ORF Names: F4P13.16
OrganismArabidopsis thaliana (Mouse-ear cress) [Complete proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsrosidseurosids IIBrassicalesBrassicaceaeArabidopsis

Protein attributes

Sequence length388 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

Sequences

Sequence LengthMass (Da)Tools
Q9SS93-1 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 6E3D0ACDBA16EDEE

FASTA38845,319
        10         20         30         40         50         60 
MSDGYRSSKK TDTICEDVCG QEGSRAGKAI SRLRCVLRGL DFKTFLFLFT LLPLFIFGIY 

        70         80         90        100        110        120 
LHGQKITYFL RPLWESPPKP FNILPHYYHE NTSMELLCNL HGWKLRESPR RVFDAALFSN 

       130        140        150        160        170        180 
EIDMLTLRWN ELNPYITQFV LLESNSTFTG LSKQLAFADN REKNFKFVEP RLTYGNVGGR 

       190        200        210        220        230        240 
FKKGENPFVE ESFQRLALDQ LIKLAGIKED DLLIMSDVDE IPSGHTINLL RWCDGFPPIL 

       250        260        270        280        290        300 
HLQLRNYLYS YEYYVDSKSW RASVHLYKPG KTRCAHFRQS NNLLTDSGWH CSFCFRHIND 

       310        320        330        340        350        360 
FVFKMKAYSH TDRVRFLHYL NPRRIQDIIC KGTDLFDMLP EEHTFREIIG KLGPIPRSYS 

       370        380 
AVHLPGYLIQ NADSYKYLLP GNCKRESG 

« Hide

References

[1]"Arabidopsis thaliana chromosome III BAC F4P13 genomic sequence."
Lin X., Kaul S., Town C.D., Benito M.-I., Creasy T.H., Haas B., Ronning C.M., Koo H., Fujii C.Y., Utterback T.R., Barnstead M.E., Bowman C.L., White O., Nierman W.C., Fraser C.M.
Submitted (JAN-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Arabidopsis Open Reading Frame (ORF) Clones."
Yamada K., Chan M.M., Chang C.H., Dale J.M., Hsuan V.W., Lee J.M., Onodera C.S., Quach H.L., Tang C., Toriumi M., Wong C., Wu H.C., Yu G., Yuan S., Carninci P., Chen H., Cheuk R., Hayashizaki Y. expand/collapse author list , Ishida J., Jones T., Kamiya A., Kawai J., Kim C.J., Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Tripp M.G., Wu T., Shinozaki K., Davis R.W., Ecker J.R., Theologis A.
Submitted (FEB-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]"Arabidopsis Full Length cDNA Clones."
Yamada K., Chan M.M., Chang C.H., Dale J.M., Hsuan V.W., Lee J.M., Onodera C.S., Quach H.L., Tang C., Toriumi M., Wong C., Wu H.C., Yu G., Yuan S., Carninci P., Chen H., Cheuk R., Hayashizaki Y. expand/collapse author list , Ishida J., Jones T., Kamiya A., Kawai J., Kim C.J., Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Tripp M.G., Wu T., Shinozaki K., Davis R.W., Ecker J.R., Theologis A.
Submitted (JAN-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

AC009325 Genomic DNA. Translation: AAF01546.1.
BT002978 mRNA. Translation: AAO22787.1.
BT004421 mRNA. Translation: AAO42415.1.
IPIIPI00519285.
RefSeqNP_186811.1.
UniGeneAt.63552

3D structure databases

ModBaseSearch...

Protein family/group databases

CAZyGT17. Glycosyltransferase Family 17.

Genome annotation databases

GeneID821102.
GenomeReviewsGene locus AT3G01620 in contig BA000014_GR.
KEGGath:AT3G01620.
NMPDRfig|3702.1.peg.12090.

Organism-specific databases

TAIRAt3g01620.

Gene expression databases

ArrayExpressQ9SS93.

Family and domain databases

InterProIPR006813. Glyco_trans_17.
[Graphical view]
PANTHERPTHR12224. Glyco_trans_17. 1 hit.
PfamPF04724. Glyco_transf_17. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9SS93_ARATH
AccessionPrimary (citable) accession number: Q9SS93
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: April 14, 2009
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information