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Unreviewed, UniProtKB/TrEMBL Q9SRZ6 (Q9SRZ6_ARATH)

Last modified June 16, 2009. Version 61. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    At1g65930/F12P19_10 EMBL AAM19856.1
Submitted name:
    F12P19.10 protein EMBL AAF06054.1
    Isocitrate dehydrogenase, putative EMBL AAO00760.1
Gene names
Ordered Locus Names: At1g65930 TAIR At1g65930
ORF Names: F12P19.10
OrganismArabidopsis thaliana (Mouse-ear cress) [Complete proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsrosidseurosids IIBrassicalesBrassicaceaeArabidopsis

Protein attributes

Sequence length410 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
Q9SRZ6-1 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 6CC3CA11AB631D28

FASTA41045,746
        10         20         30         40         50         60 
MAFEKIKVAN PIVEMDGDEM TRVIWKSIKD KLITPFVELD IKYFDLGLPH RDATDDKVTI 

        70         80         90        100        110        120 
ESAEATKKYN VAIKCATITP DEGRVTEFGL KQMWRSPNGT IRNILNGTVF REPIICKNVP 

       130        140        150        160        170        180 
KLVPGWTKPI CIGRHAFGDQ YRATDAVIKG PGKLTMTFEG KDGKTETEVF TFTGEGGVAM 

       190        200        210        220        230        240 
AMYNTDESIR AFADASMNTA YEKKWPLYLS TKNTILKKYD GRFKDIFQEV YEASWKSKYD 

       250        260        270        280        290        300 
AAGIWYEHRL IDDMVAYALK SEGGYVWACK NYDGDVQSDF LAQGFGSLGL MTSVLVCPDG 

       310        320        330        340        350        360 
KTIEAEAAHG TVTRHFRVHQ KGGETSTNSI ASIFAWTRGL AHRAKLDDNA KLLDFTEKLE 

       370        380        390        400        410 
AACVGTVESG KMTKDLALII HGSKLSRDTY LNTEEFIDAV AAELKERLNA 

« Hide

References

[1]"Arabidopsis thaliana chromosome 1 BAC F12P19 sequence."
Schwartz J.R., Yu G., Toriumi M., Lenz C., Liu S., Lee J.M., Li J., Gonzalez A., Liu A., Liu K., Sakano H., Vaysberg M., Chin C., Choi E., Chiou J., Altafi H., Araujo R., Brooks S. expand/collapse author list , Buehler E., Chao Q., Conn L., Conway A., Dunn P., Hansen N., Howng B., Huizar L., Johnson-Hopson C., Khan S., Kim C., Lam B., Nguyen M., Palm C., Rowley D., Shinn P., Southwick A., Tambunga G., Walker M., Davis R.W., Ecker J.R., Federspiel N.A., Theologis A.
Submitted (NOV-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]Southwick A., Nguyen M., Tripp M., Palm C.J., Jones T., Wu T., Carninci P., Chen H., Cheuk R., Chan M.M., Chang C.H., Dale J.M., Deng J.M., Hayashizaki Y., Hsuan V.W., Lee J.M., Ishida J., Kamiya A. expand/collapse author list , Kawai J., Kim C.J., Narusaka M., Onodera C.S., Quach H.L., Sakurai T., Satou M., Seki M., Shinn P., Tang C.C., Toroumi M., Wong C., Wu H.C., Yamada K., Yu G., Yuan S., Shinozaki K., Ecker J., Theologis A., Davis R.W.
Submitted (DEC-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]"Arabidopsis ORF clones."
Kim C.J., Chen H., Cheuk R., Meyers M.C., Shinn P., Banh J., Bowser L., Carninci P., Chang E., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B. expand/collapse author list , Lee J.M., Lin J., Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M., Wu H.C., Yamada K., Yamamura Y., Yu G., Yu S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
Submitted (APR-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[4]"Arabidopsis cDNA clones."
Kim C.J., Chen H., Cheuk R., Koesema E., Meyers M.C., Banh J., Bowser L., Carninci P., Dale J.M., Gibson H.A., Goldsmith A.D., Hayashizaki Y., Ishida J., Jiang P.X., Jones T., Kamiya A., Karlin-Neumann G., Kawai J. expand/collapse author list , Lam B., Lee J.M., Lin J., Liu S.X., Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Pham P.K., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M., Yamada K., Yu G., Yu S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
Submitted (JUL-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[5]"Arabidopsis cDNA clones."
Cheuk R., Chen H., Kim C.J., Koesema E., Meyers M.C., Banh J., Bowser L., Carninci P., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., Jiang P.X., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B. expand/collapse author list , Lee J.M., Lin J., Liu S.X., Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Pham P.K., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M., Yamada K., Yamamura Y., Yu G., Yu S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
Submitted (SEP-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

AC009513 Genomic DNA. Translation: AAF06054.1.
AY045631 mRNA. Translation: AAK73989.1.
AF419575 mRNA. Translation: AAL31907.1.
AY097340 mRNA. Translation: AAM19856.1.
BT002400 mRNA. Translation: AAO00760.1.
IPIIPI00539206.
PIRF96683.
RefSeqNP_176768.1.
UniGeneAt.24713

3D structure databases

HSSPHSSP built from PDB template 1LWD based on UniProtKB P33198.
ModBaseSearch...

Protein-protein interaction databases

IntActQ9SRZ6. 1 interaction.

Proteomic databases

PRIDEQ9SRZ6.

Genome annotation databases

GeneID842905.
KEGGath:AT1G65930.
NMPDRfig|3702.1.peg.6015.

Organism-specific databases

TAIRAt1g65930.

Phylogenomic databases

OMAQ9SRZ6. PRIPRIV.

Family and domain databases

InterProIPR019818. IsoCit/isopropylmalate_DH_CS.
IPR001804. Isocitrate/isopropylmalate_DH.
IPR004790. Isocitrate_DH_NADP-dep_euk.
[Graphical view]
Gene3DG3DSA:3.40.718.10. IDH_IMDH. 1 hit.
PANTHERPTHR11822. IDH_NADP_euk. 1 hit.
PfamPF00180. Iso_dh. 1 hit.
[Graphical view]
PIRSFPIRSF000108. IDH_NADP. 1 hit.
TIGRFAMsTIGR00127. nadp_idh_euk. 1 hit.
PROSITEPS00470. IDH_IMDH. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9SRZ6_ARATH
AccessionPrimary (citable) accession number: Q9SRZ6
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: June 16, 2009
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information