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Q9SRQ1

- C89A9_ARATH

UniProt

Q9SRQ1 - C89A9_ARATH

Protein

Cytochrome P450 89A9

Gene

CYP89A9

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 105 (01 Oct 2014)
      Sequence version 1 (01 May 2000)
      Previous versions | rss
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    Functioni

    Involved in the chlorophyll breakdown by its action in nonpolar fluorescent chlorophyll catabolite (FCC) decarbonylation.1 Publication

    Cofactori

    Heme group.By similarity

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi454 – 4541Iron (heme axial ligand)By similarity

    GO - Molecular functioni

    1. heme binding Source: InterPro
    2. iron ion binding Source: InterPro
    3. monooxygenase activity Source: UniProtKB-KW
    4. oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen Source: InterPro

    Keywords - Molecular functioni

    Monooxygenase, Oxidoreductase

    Keywords - Ligandi

    Heme, Iron, Metal-binding

    Enzyme and pathway databases

    BioCyciARA:AT3G03470-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Cytochrome P450 89A9 (EC:1.14.-.-)
    Gene namesi
    Name:CYP89A9
    Ordered Locus Names:At3g03470
    ORF Names:T21P5.11
    OrganismiArabidopsis thaliana (Mouse-ear cress)
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000006548: Chromosome 3

    Organism-specific databases

    TAIRiAT3G03470.

    Subcellular locationi

    Endoplasmic reticulum membrane 1 Publication; Single-pass membrane protein 1 Publication

    GO - Cellular componenti

    1. endoplasmic reticulum membrane Source: UniProtKB-SubCell
    2. integral component of membrane Source: UniProtKB-KW

    Keywords - Cellular componenti

    Endoplasmic reticulum, Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 511511Cytochrome P450 89A9PRO_0000416128Add
    BLAST

    Proteomic databases

    PRIDEiQ9SRQ1.

    Expressioni

    Gene expression databases

    GenevestigatoriQ9SRQ1.

    Interactioni

    Protein-protein interaction databases

    STRINGi3702.AT3G03470.1-P.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9SRQ1.
    SMRiQ9SRQ1. Positions 30-488.
    ModBaseiSearch...
    MobiDBiSearch...

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei6 – 2621HelicalSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Compositional bias

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Compositional biasi343 – 3497Poly-Glu

    Sequence similaritiesi

    Belongs to the cytochrome P450 family.Curated

    Keywords - Domaini

    Transmembrane, Transmembrane helix

    Phylogenomic databases

    HOGENOMiHOG000218630.
    InParanoidiQ9SRQ1.
    OMAiHPPGHYL.
    PhylomeDBiQ9SRQ1.

    Family and domain databases

    Gene3Di1.10.630.10. 1 hit.
    InterProiIPR001128. Cyt_P450.
    IPR017972. Cyt_P450_CS.
    IPR002401. Cyt_P450_E_grp-I.
    [Graphical view]
    PfamiPF00067. p450. 1 hit.
    [Graphical view]
    PRINTSiPR00463. EP450I.
    PR00385. P450.
    SUPFAMiSSF48264. SSF48264. 1 hit.
    PROSITEiPS00086. CYTOCHROME_P450. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q9SRQ1-1 [UniParc]FASTAAdd to Basket

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    MEITTIIFLI ISSLTFSIFL KLIFFFSTHK LPPGPPRFPV IGNIIWLKKN    50
    NFSDFQGVLR DLASRHGPII TLHVGSKPSI WVTDRSLAHQ ALVQNGAVFS 100
    DRSLALPTTK VITSNQHDIH SSVYGSLWRT LRRNLTSEIL QPSRVKAHAP 150
    SRKWSLEILV DLFETEQREK GHISDALDHL RHAMFYLLAL MCFGEKLRKE 200
    EIREIEEAQY QMLISYTKFS VLNIFPSVTK FLLRRKWKEF LELRKSQESV 250
    ILRYVNARSK ETTGDVLCYV DTLLNLEIPT EEKEGGKKRK LSDSEIVSLC 300
    SEFLNAATDP TATSMQWIMA IMVKYPEIQR KVYEEMKTVF AGEEEEREEI 350
    REEDLGKLSY LKAVILECLR RHPPGHYLSY HKVTHDTVLG GFLIPRQGTI 400
    NFMVGEMGRD PKIWEDPLTF KPERFLENGE ACDFDMTGTR EIKMMPFGAG 450
    RRMCPGYALS LLHLEYYVAN LVWKFEWKCV EGEEVDLSEK QQFITMVMKN 500
    PFKANIYPRR K 511
    Length:511
    Mass (Da):59,255
    Last modified:May 1, 2000 - v1
    Checksum:i92B0488E7B204034
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti385 – 3851H → R in AAL11575. (PubMed:14593172)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC009895 Genomic DNA. Translation: AAF01588.1.
    CP002686 Genomic DNA. Translation: AEE73948.1.
    AF424581 mRNA. Translation: AAL11575.1.
    BT015915 mRNA. Translation: AAU95451.1.
    RefSeqiNP_186997.1. NM_111218.3.
    UniGeneiAt.24475.
    At.67330.

    Genome annotation databases

    EnsemblPlantsiAT3G03470.1; AT3G03470.1; AT3G03470.
    GeneIDi821250.
    KEGGiath:AT3G03470.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC009895 Genomic DNA. Translation: AAF01588.1 .
    CP002686 Genomic DNA. Translation: AEE73948.1 .
    AF424581 mRNA. Translation: AAL11575.1 .
    BT015915 mRNA. Translation: AAU95451.1 .
    RefSeqi NP_186997.1. NM_111218.3.
    UniGenei At.24475.
    At.67330.

    3D structure databases

    ProteinModelPortali Q9SRQ1.
    SMRi Q9SRQ1. Positions 30-488.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 3702.AT3G03470.1-P.

    Proteomic databases

    PRIDEi Q9SRQ1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi AT3G03470.1 ; AT3G03470.1 ; AT3G03470 .
    GeneIDi 821250.
    KEGGi ath:AT3G03470.

    Organism-specific databases

    GeneFarmi 1224. 94.
    TAIRi AT3G03470.

    Phylogenomic databases

    HOGENOMi HOG000218630.
    InParanoidi Q9SRQ1.
    OMAi HPPGHYL.
    PhylomeDBi Q9SRQ1.

    Enzyme and pathway databases

    BioCyci ARA:AT3G03470-MONOMER.

    Gene expression databases

    Genevestigatori Q9SRQ1.

    Family and domain databases

    Gene3Di 1.10.630.10. 1 hit.
    InterProi IPR001128. Cyt_P450.
    IPR017972. Cyt_P450_CS.
    IPR002401. Cyt_P450_E_grp-I.
    [Graphical view ]
    Pfami PF00067. p450. 1 hit.
    [Graphical view ]
    PRINTSi PR00463. EP450I.
    PR00385. P450.
    SUPFAMi SSF48264. SSF48264. 1 hit.
    PROSITEi PS00086. CYTOCHROME_P450. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana."
      Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B., Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N., Artiguenave F.
      , Robert C., Brottier P., Wincker P., Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H., Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A., Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H., Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J., Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B., Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D., de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E., Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G., Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X., Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M., Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B., Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J., Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C., Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y., Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K., Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
      Nature 408:820-822(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Columbia.
    2. The Arabidopsis Information Resource (TAIR)
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: GENOME REANNOTATION.
      Strain: cv. Columbia.
    3. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
      Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
      , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
      Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Columbia.
    4. "Arabidopsis ORF clones."
      Cheuk R., Chen H., Kim C.J., Shinn P., Ecker J.R.
      Submitted (OCT-2004) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Columbia.
    5. Cited for: REVIEW.
    6. "A cytochrome P450 monooxygenase is involved in chlorophyll breakdown in Arabidopsis thaliana."
      Christ B., Bichsel N., Hoertensteiner S.
      Unpublished observations (JAN-2012)
      Cited for: FUNCTION, SUBCELLULAR LOCATION.

    Entry informationi

    Entry nameiC89A9_ARATH
    AccessioniPrimary (citable) accession number: Q9SRQ1
    Secondary accession number(s): Q944R6
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 21, 2012
    Last sequence update: May 1, 2000
    Last modified: October 1, 2014
    This is version 105 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Arabidopsis thaliana
      Arabidopsis thaliana: entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3