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Q9SRQ1

- C89A9_ARATH

UniProt

Q9SRQ1 - C89A9_ARATH

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Protein

Cytochrome P450 89A9

Gene

CYP89A9

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli

Functioni

Involved in the chlorophyll breakdown by its action in nonpolar fluorescent chlorophyll catabolite (FCC) decarbonylation.1 Publication

Cofactori

hemeBy similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi454 – 4541Iron (heme axial ligand)By similarity

GO - Molecular functioni

  1. heme binding Source: InterPro
  2. iron ion binding Source: InterPro
  3. monooxygenase activity Source: UniProtKB-KW
  4. oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Monooxygenase, Oxidoreductase

Keywords - Ligandi

Heme, Iron, Metal-binding

Enzyme and pathway databases

BioCyciARA:AT3G03470-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Cytochrome P450 89A9 (EC:1.14.-.-)
Gene namesi
Name:CYP89A9
Ordered Locus Names:At3g03470
ORF Names:T21P5.11
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 3

Organism-specific databases

TAIRiAT3G03470.

Subcellular locationi

Endoplasmic reticulum membrane 1 Publication; Single-pass membrane protein 1 Publication

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei6 – 2621HelicalSequence AnalysisAdd
BLAST

GO - Cellular componenti

  1. endoplasmic reticulum Source: UniProtKB-KW
  2. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Endoplasmic reticulum, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 511511Cytochrome P450 89A9PRO_0000416128Add
BLAST

Proteomic databases

PRIDEiQ9SRQ1.

Expressioni

Gene expression databases

GenevestigatoriQ9SRQ1.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT3G03470.1-P.

Structurei

3D structure databases

ProteinModelPortaliQ9SRQ1.
SMRiQ9SRQ1. Positions 30-488.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi343 – 3497Poly-Glu

Sequence similaritiesi

Belongs to the cytochrome P450 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

HOGENOMiHOG000218630.
InParanoidiQ9SRQ1.
OMAiHPPGHYL.
PhylomeDBiQ9SRQ1.

Family and domain databases

Gene3Di1.10.630.10. 1 hit.
InterProiIPR001128. Cyt_P450.
IPR017972. Cyt_P450_CS.
IPR002401. Cyt_P450_E_grp-I.
[Graphical view]
PfamiPF00067. p450. 1 hit.
[Graphical view]
PRINTSiPR00463. EP450I.
PR00385. P450.
SUPFAMiSSF48264. SSF48264. 1 hit.
PROSITEiPS00086. CYTOCHROME_P450. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9SRQ1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MEITTIIFLI ISSLTFSIFL KLIFFFSTHK LPPGPPRFPV IGNIIWLKKN
60 70 80 90 100
NFSDFQGVLR DLASRHGPII TLHVGSKPSI WVTDRSLAHQ ALVQNGAVFS
110 120 130 140 150
DRSLALPTTK VITSNQHDIH SSVYGSLWRT LRRNLTSEIL QPSRVKAHAP
160 170 180 190 200
SRKWSLEILV DLFETEQREK GHISDALDHL RHAMFYLLAL MCFGEKLRKE
210 220 230 240 250
EIREIEEAQY QMLISYTKFS VLNIFPSVTK FLLRRKWKEF LELRKSQESV
260 270 280 290 300
ILRYVNARSK ETTGDVLCYV DTLLNLEIPT EEKEGGKKRK LSDSEIVSLC
310 320 330 340 350
SEFLNAATDP TATSMQWIMA IMVKYPEIQR KVYEEMKTVF AGEEEEREEI
360 370 380 390 400
REEDLGKLSY LKAVILECLR RHPPGHYLSY HKVTHDTVLG GFLIPRQGTI
410 420 430 440 450
NFMVGEMGRD PKIWEDPLTF KPERFLENGE ACDFDMTGTR EIKMMPFGAG
460 470 480 490 500
RRMCPGYALS LLHLEYYVAN LVWKFEWKCV EGEEVDLSEK QQFITMVMKN
510
PFKANIYPRR K
Length:511
Mass (Da):59,255
Last modified:May 1, 2000 - v1
Checksum:i92B0488E7B204034
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti385 – 3851H → R in AAL11575. (PubMed:14593172)Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC009895 Genomic DNA. Translation: AAF01588.1.
CP002686 Genomic DNA. Translation: AEE73948.1.
AF424581 mRNA. Translation: AAL11575.1.
BT015915 mRNA. Translation: AAU95451.1.
RefSeqiNP_186997.1. NM_111218.3.
UniGeneiAt.24475.
At.67330.

Genome annotation databases

EnsemblPlantsiAT3G03470.1; AT3G03470.1; AT3G03470.
GeneIDi821250.
KEGGiath:AT3G03470.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC009895 Genomic DNA. Translation: AAF01588.1 .
CP002686 Genomic DNA. Translation: AEE73948.1 .
AF424581 mRNA. Translation: AAL11575.1 .
BT015915 mRNA. Translation: AAU95451.1 .
RefSeqi NP_186997.1. NM_111218.3.
UniGenei At.24475.
At.67330.

3D structure databases

ProteinModelPortali Q9SRQ1.
SMRi Q9SRQ1. Positions 30-488.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 3702.AT3G03470.1-P.

Proteomic databases

PRIDEi Q9SRQ1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT3G03470.1 ; AT3G03470.1 ; AT3G03470 .
GeneIDi 821250.
KEGGi ath:AT3G03470.

Organism-specific databases

GeneFarmi 1224. 94.
TAIRi AT3G03470.

Phylogenomic databases

HOGENOMi HOG000218630.
InParanoidi Q9SRQ1.
OMAi HPPGHYL.
PhylomeDBi Q9SRQ1.

Enzyme and pathway databases

BioCyci ARA:AT3G03470-MONOMER.

Gene expression databases

Genevestigatori Q9SRQ1.

Family and domain databases

Gene3Di 1.10.630.10. 1 hit.
InterProi IPR001128. Cyt_P450.
IPR017972. Cyt_P450_CS.
IPR002401. Cyt_P450_E_grp-I.
[Graphical view ]
Pfami PF00067. p450. 1 hit.
[Graphical view ]
PRINTSi PR00463. EP450I.
PR00385. P450.
SUPFAMi SSF48264. SSF48264. 1 hit.
PROSITEi PS00086. CYTOCHROME_P450. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana."
    Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B., Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N., Artiguenave F.
    , Robert C., Brottier P., Wincker P., Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H., Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A., Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H., Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J., Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B., Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D., de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E., Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G., Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X., Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M., Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B., Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J., Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C., Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y., Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K., Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    Nature 408:820-822(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
    Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
    , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
    Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.
  4. "Arabidopsis ORF clones."
    Cheuk R., Chen H., Kim C.J., Shinn P., Ecker J.R.
    Submitted (OCT-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.
  5. Cited for: REVIEW.
  6. "A cytochrome P450 monooxygenase is involved in chlorophyll breakdown in Arabidopsis thaliana."
    Christ B., Bichsel N., Hoertensteiner S.
    Unpublished observations (JAN-2012)
    Cited for: FUNCTION, SUBCELLULAR LOCATION.

Entry informationi

Entry nameiC89A9_ARATH
AccessioniPrimary (citable) accession number: Q9SRQ1
Secondary accession number(s): Q944R6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 21, 2012
Last sequence update: May 1, 2000
Last modified: November 26, 2014
This is version 107 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3