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Protein

Probable calcium-binding protein CML34

Gene

CML34

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Potential calcium sensor.By similarity

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Calcium bindingi11 – 22121Add
BLAST
Calcium bindingi47 – 58122Add
BLAST
Calcium bindingi111 – 122123PROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

Calcium, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Probable calcium-binding protein CML34
Alternative name(s):
Calmodulin-like protein 2
Calmodulin-like protein 34
Gene namesi
Name:CML34
Ordered Locus Names:At3g03410
ORF Names:T21P5.17
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 3

Organism-specific databases

TAIRiAT3G03410.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 131131Probable calcium-binding protein CML34PRO_0000073660Add
BLAST

Proteomic databases

PaxDbiQ9SRP5.
PRIDEiQ9SRP5.

Expressioni

Gene expression databases

GenevisibleiQ9SRP5. AT.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT3G03410.1.

Structurei

Secondary structure

1
131
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi3 – 108Combined sources
Beta strandi14 – 163Combined sources
Helixi20 – 2910Combined sources
Helixi36 – 4611Combined sources
Beta strandi49 – 546Combined sources
Helixi56 – 649Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1TIZNMR-A2-67[»]
ProteinModelPortaliQ9SRP5.
SMRiQ9SRP5. Positions 2-127.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9SRP5.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 3333EF-hand 1PROSITE-ProRule annotationAdd
BLAST
Domaini34 – 6936EF-hand 2PROSITE-ProRule annotationAdd
BLAST
Domaini62 – 9736EF-hand 3PROSITE-ProRule annotationAdd
BLAST
Domaini98 – 13134EF-hand 4PROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 4 EF-hand domains.PROSITE-ProRule annotation

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiKOG0027. Eukaryota.
COG5126. LUCA.
HOGENOMiHOG000233018.
InParanoidiQ9SRP5.
KOiK13448.
OMAiEFTSCIE.
OrthoDBiEOG09361891.
PhylomeDBiQ9SRP5.

Family and domain databases

Gene3Di1.10.238.10. 2 hits.
InterProiIPR011992. EF-hand-dom_pair.
IPR018247. EF_Hand_1_Ca_BS.
IPR002048. EF_hand_dom.
[Graphical view]
PfamiPF13499. EF-hand_7. 2 hits.
[Graphical view]
SMARTiSM00054. EFh. 4 hits.
[Graphical view]
SUPFAMiSSF47473. SSF47473. 1 hit.
PROSITEiPS00018. EF_HAND_1. 3 hits.
PS50222. EF_HAND_2. 4 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9SRP5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSAKRVFEKF DKNKDGKLSL DEFREVALAF SPYFTQEDIV KFFEEIDVDG
60 70 80 90 100
NGELNADEFT SCIEKMLKEV FVFCDVDGDG KIPASESYVT MTSLGKKFTE
110 120 130
ETSAEKVRAA DVDGDGYLNF DEFMALVIGD I
Length:131
Mass (Da):14,732
Last modified:May 1, 2000 - v1
Checksum:iC82718702E488BE6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC009895 Genomic DNA. Translation: AAF01604.1.
CP002686 Genomic DNA. Translation: AEE73941.1.
BT029360 mRNA. Translation: ABK32174.1.
RefSeqiNP_186991.1. NM_111212.1.
UniGeneiAt.49587.

Genome annotation databases

EnsemblPlantsiAT3G03410.1; AT3G03410.1; AT3G03410.
GeneIDi821262.
GrameneiAT3G03410.1; AT3G03410.1; AT3G03410.
KEGGiath:AT3G03410.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC009895 Genomic DNA. Translation: AAF01604.1.
CP002686 Genomic DNA. Translation: AEE73941.1.
BT029360 mRNA. Translation: ABK32174.1.
RefSeqiNP_186991.1. NM_111212.1.
UniGeneiAt.49587.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1TIZNMR-A2-67[»]
ProteinModelPortaliQ9SRP5.
SMRiQ9SRP5. Positions 2-127.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT3G03410.1.

Proteomic databases

PaxDbiQ9SRP5.
PRIDEiQ9SRP5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT3G03410.1; AT3G03410.1; AT3G03410.
GeneIDi821262.
GrameneiAT3G03410.1; AT3G03410.1; AT3G03410.
KEGGiath:AT3G03410.

Organism-specific databases

TAIRiAT3G03410.

Phylogenomic databases

eggNOGiKOG0027. Eukaryota.
COG5126. LUCA.
HOGENOMiHOG000233018.
InParanoidiQ9SRP5.
KOiK13448.
OMAiEFTSCIE.
OrthoDBiEOG09361891.
PhylomeDBiQ9SRP5.

Miscellaneous databases

EvolutionaryTraceiQ9SRP5.
PROiQ9SRP5.

Gene expression databases

GenevisibleiQ9SRP5. AT.

Family and domain databases

Gene3Di1.10.238.10. 2 hits.
InterProiIPR011992. EF-hand-dom_pair.
IPR018247. EF_Hand_1_Ca_BS.
IPR002048. EF_hand_dom.
[Graphical view]
PfamiPF13499. EF-hand_7. 2 hits.
[Graphical view]
SMARTiSM00054. EFh. 4 hits.
[Graphical view]
SUPFAMiSSF47473. SSF47473. 1 hit.
PROSITEiPS00018. EF_HAND_1. 3 hits.
PS50222. EF_HAND_2. 4 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiCML34_ARATH
AccessioniPrimary (citable) accession number: Q9SRP5
Secondary accession number(s): A0JPZ0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 30, 2005
Last sequence update: May 1, 2000
Last modified: September 7, 2016
This is version 97 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Caution

Although assigned as a calmodulin family member by Ref. 4, it only contains EF-hand domains.Curated

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.