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Protein

Probable calcium-binding protein CML34

Gene

CML34

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Potential calcium sensor.By similarity

Caution

Although assigned as a calmodulin family member by Ref. 4, it only contains EF-hand domains.Curated

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Calcium bindingi11 – 221Add BLAST12
Calcium bindingi47 – 582Add BLAST12
Calcium bindingi111 – 1223PROSITE-ProRule annotationAdd BLAST12

GO - Molecular functioni

Keywordsi

LigandCalcium, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Probable calcium-binding protein CML34
Alternative name(s):
Calmodulin-like protein 2
Calmodulin-like protein 34
Gene namesi
Name:CML34
Ordered Locus Names:At3g03410
ORF Names:T21P5.17
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 3

Organism-specific databases

AraportiAT3G03410
TAIRilocus:2099679 AT3G03410

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000736601 – 131Probable calcium-binding protein CML34Add BLAST131

Proteomic databases

PaxDbiQ9SRP5

Expressioni

Gene expression databases

ExpressionAtlasiQ9SRP5 baseline and differential
GenevisibleiQ9SRP5 AT

Interactioni

Protein-protein interaction databases

STRINGi3702.AT3G03410.1

Structurei

Secondary structure

1131
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi3 – 10Combined sources8
Beta strandi14 – 16Combined sources3
Helixi20 – 29Combined sources10
Helixi36 – 46Combined sources11
Beta strandi49 – 54Combined sources6
Helixi56 – 64Combined sources9

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1TIZNMR-A2-67[»]
ProteinModelPortaliQ9SRP5
SMRiQ9SRP5
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9SRP5

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 33EF-hand 1PROSITE-ProRule annotationAdd BLAST33
Domaini34 – 69EF-hand 2PROSITE-ProRule annotationAdd BLAST36
Domaini62 – 97EF-hand 3PROSITE-ProRule annotationAdd BLAST36
Domaini98 – 131EF-hand 4PROSITE-ProRule annotationAdd BLAST34

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiKOG0027 Eukaryota
COG5126 LUCA
HOGENOMiHOG000233018
InParanoidiQ9SRP5
KOiK13448
OMAiEFTSCIE
OrthoDBiEOG09361891
PhylomeDBiQ9SRP5

Family and domain databases

CDDicd00051 EFh, 1 hit
InterProiView protein in InterPro
IPR011992 EF-hand-dom_pair
IPR018247 EF_Hand_1_Ca_BS
IPR002048 EF_hand_dom
PfamiView protein in Pfam
PF13499 EF-hand_7, 2 hits
SMARTiView protein in SMART
SM00054 EFh, 4 hits
SUPFAMiSSF47473 SSF47473, 1 hit
PROSITEiView protein in PROSITE
PS00018 EF_HAND_1, 3 hits
PS50222 EF_HAND_2, 4 hits

Sequencei

Sequence statusi: Complete.

Q9SRP5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSAKRVFEKF DKNKDGKLSL DEFREVALAF SPYFTQEDIV KFFEEIDVDG
60 70 80 90 100
NGELNADEFT SCIEKMLKEV FVFCDVDGDG KIPASESYVT MTSLGKKFTE
110 120 130
ETSAEKVRAA DVDGDGYLNF DEFMALVIGD I
Length:131
Mass (Da):14,732
Last modified:May 1, 2000 - v1
Checksum:iC82718702E488BE6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC009895 Genomic DNA Translation: AAF01604.1
CP002686 Genomic DNA Translation: AEE73941.1
BT029360 mRNA Translation: ABK32174.1
RefSeqiNP_186991.1, NM_111212.1
UniGeneiAt.49587

Genome annotation databases

EnsemblPlantsiAT3G03410.1; AT3G03410.1; AT3G03410
GeneIDi821262
GrameneiAT3G03410.1; AT3G03410.1; AT3G03410
KEGGiath:AT3G03410

Similar proteinsi

Entry informationi

Entry nameiCML34_ARATH
AccessioniPrimary (citable) accession number: Q9SRP5
Secondary accession number(s): A0JPZ0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 30, 2005
Last sequence update: May 1, 2000
Last modified: April 25, 2018
This is version 109 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

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