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Protein

Hypersensitive-induced response protein 3

Gene

HIR3

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

  • defense response to fungus Source: TAIR
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Hypersensitive-induced response protein 3
Short name:
AtHIR3
Gene namesi
Name:HIR3
Synonyms:P31
Ordered Locus Names:At3g01290
ORF Names:T22N4.8, T4P13.3
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 3

Organism-specific databases

TAIRiAT3G01290.

Subcellular locationi

GO - Cellular componenti

  • membrane Source: TAIR
  • mitochondrion Source: TAIR
  • plasma membrane Source: TAIR
  • plasmodesma Source: TAIR
  • vacuolar membrane Source: TAIR
  • vacuole Source: TAIR
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedSequence analysis
ChainiPRO_00003985982 – 285Hypersensitive-induced response protein 3Add BLAST284

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Lipidationi2N-myristoyl glycineSequence analysis1

Keywords - PTMi

Lipoprotein, Myristate

Proteomic databases

PaxDbiQ9SRH6.
PRIDEiQ9SRH6.

PTM databases

iPTMnetiQ9SRH6.
SwissPalmiQ9SRH6.

Expressioni

Gene expression databases

GenevisibleiQ9SRH6. AT.

Interactioni

Subunit structurei

Self-interacts and forms heteromers. Interacts with NB-LRR class of R proteins before R proteins (e.g. RPS2 or RPM1) are activated by the effectors.1 Publication

Protein-protein interaction databases

BioGridi6642. 5 interactors.
IntActiQ9SRH6. 6 interactors.
STRINGi3702.AT3G01290.1.

Structurei

3D structure databases

ProteinModelPortaliQ9SRH6.
SMRiQ9SRH6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili113 – 139Sequence analysisAdd BLAST27
Coiled coili165 – 185Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiKOG2620. Eukaryota.
COG0330. LUCA.
HOGENOMiHOG000035168.
InParanoidiQ9SRH6.
OMAiGLLQANN.
OrthoDBiEOG09360J34.
PhylomeDBiQ9SRH6.

Family and domain databases

InterProiIPR001107. Band_7.
IPR001972. Stomatin_fam.
[Graphical view]
PANTHERiPTHR10264. PTHR10264. 1 hit.
PfamiPF01145. Band_7. 1 hit.
[Graphical view]
SMARTiSM00244. PHB. 1 hit.
[Graphical view]
SUPFAMiSSF117892. SSF117892. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9SRH6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGNLFCCVLV KQSDVAVKER FGKFQKVLNP GLQFVPWVIG DYVAGTLTLR
60 70 80 90 100
LQQLDVQCET KTKDNVFVTV VASIQYRVLA DKASDAFYRL SNPTTQIKAY
110 120 130 140 150
VFDVIRACVP KLNLDDVFEQ KNEIAKSVEE ELDKAMTAYG YEILQTLIID
160 170 180 190 200
IEPDQQVKRA MNEINAAARM RVAASEKAEA EKIIQIKRAE GEAESKYLSG
210 220 230 240 250
LGIARQRQAI VDGLRDSVLG FAGNVPGTSA KDVLDMVMMT QYFDTMRDIG
260 270 280
ATSKSSAVFI PHGPGAVSDV AAQIRNGLLQ ANNAS
Length:285
Mass (Da):31,321
Last modified:May 1, 2000 - v1
Checksum:i57A46F2A29CFB74C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC008261 Genomic DNA. Translation: AAF26146.1.
AC010676 Genomic DNA. Translation: AAF03497.1.
CP002686 Genomic DNA. Translation: AEE73633.1.
BT024707 mRNA. Translation: ABD59045.1.
AY084426 mRNA. Translation: AAM61000.1.
RefSeqiNP_566135.1. NM_110995.3.
UniGeneiAt.43760.

Genome annotation databases

EnsemblPlantsiAT3G01290.1; AT3G01290.1; AT3G01290.
GeneIDi821309.
GrameneiAT3G01290.1; AT3G01290.1; AT3G01290.
KEGGiath:AT3G01290.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC008261 Genomic DNA. Translation: AAF26146.1.
AC010676 Genomic DNA. Translation: AAF03497.1.
CP002686 Genomic DNA. Translation: AEE73633.1.
BT024707 mRNA. Translation: ABD59045.1.
AY084426 mRNA. Translation: AAM61000.1.
RefSeqiNP_566135.1. NM_110995.3.
UniGeneiAt.43760.

3D structure databases

ProteinModelPortaliQ9SRH6.
SMRiQ9SRH6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi6642. 5 interactors.
IntActiQ9SRH6. 6 interactors.
STRINGi3702.AT3G01290.1.

PTM databases

iPTMnetiQ9SRH6.
SwissPalmiQ9SRH6.

Proteomic databases

PaxDbiQ9SRH6.
PRIDEiQ9SRH6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT3G01290.1; AT3G01290.1; AT3G01290.
GeneIDi821309.
GrameneiAT3G01290.1; AT3G01290.1; AT3G01290.
KEGGiath:AT3G01290.

Organism-specific databases

TAIRiAT3G01290.

Phylogenomic databases

eggNOGiKOG2620. Eukaryota.
COG0330. LUCA.
HOGENOMiHOG000035168.
InParanoidiQ9SRH6.
OMAiGLLQANN.
OrthoDBiEOG09360J34.
PhylomeDBiQ9SRH6.

Miscellaneous databases

PROiQ9SRH6.

Gene expression databases

GenevisibleiQ9SRH6. AT.

Family and domain databases

InterProiIPR001107. Band_7.
IPR001972. Stomatin_fam.
[Graphical view]
PANTHERiPTHR10264. PTHR10264. 1 hit.
PfamiPF01145. Band_7. 1 hit.
[Graphical view]
SMARTiSM00244. PHB. 1 hit.
[Graphical view]
SUPFAMiSSF117892. SSF117892. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiHIR3_ARATH
AccessioniPrimary (citable) accession number: Q9SRH6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 5, 2010
Last sequence update: May 1, 2000
Last modified: November 30, 2016
This is version 89 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.