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Protein

Hypersensitive-induced response protein 3

Gene

HIR3

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Biological processi

  • response to oomycetes Source: TAIR

Names & Taxonomyi

Protein namesi
Recommended name:
Hypersensitive-induced response protein 3
Short name:
AtHIR3
Gene namesi
Name:HIR3
Synonyms:P31
Ordered Locus Names:At3g01290
ORF Names:T22N4.8, T4P13.3
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 3

Organism-specific databases

AraportiAT3G01290
TAIRilocus:2100242 AT3G01290

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedSequence analysis
ChainiPRO_00003985982 – 285Hypersensitive-induced response protein 3Add BLAST284

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Lipidationi2N-myristoyl glycineSequence analysis1

Keywords - PTMi

Lipoprotein, Myristate

Proteomic databases

PaxDbiQ9SRH6
PRIDEiQ9SRH6

PTM databases

iPTMnetiQ9SRH6
SwissPalmiQ9SRH6

Expressioni

Gene expression databases

ExpressionAtlasiQ9SRH6 baseline and differential
GenevisibleiQ9SRH6 AT

Interactioni

Subunit structurei

Self-interacts and forms heteromers. Interacts with NB-LRR class of R proteins before R proteins (e.g. RPS2 or RPM1) are activated by the effectors.1 Publication

Protein-protein interaction databases

BioGridi6642, 5 interactors
IntActiQ9SRH6, 6 interactors
MINTiQ9SRH6
STRINGi3702.AT3G01290.1

Structurei

3D structure databases

ProteinModelPortaliQ9SRH6
SMRiQ9SRH6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili113 – 139Sequence analysisAdd BLAST27
Coiled coili165 – 185Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiKOG2620 Eukaryota
COG0330 LUCA
HOGENOMiHOG000035168
InParanoidiQ9SRH6
OMAiTTQIKAY
OrthoDBiEOG09360J34
PhylomeDBiQ9SRH6

Family and domain databases

InterProiView protein in InterPro
IPR001107 Band_7
IPR036013 Band_7/SPFH_dom_sf
PfamiView protein in Pfam
PF01145 Band_7, 1 hit
SMARTiView protein in SMART
SM00244 PHB, 1 hit
SUPFAMiSSF117892 SSF117892, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9SRH6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGNLFCCVLV KQSDVAVKER FGKFQKVLNP GLQFVPWVIG DYVAGTLTLR
60 70 80 90 100
LQQLDVQCET KTKDNVFVTV VASIQYRVLA DKASDAFYRL SNPTTQIKAY
110 120 130 140 150
VFDVIRACVP KLNLDDVFEQ KNEIAKSVEE ELDKAMTAYG YEILQTLIID
160 170 180 190 200
IEPDQQVKRA MNEINAAARM RVAASEKAEA EKIIQIKRAE GEAESKYLSG
210 220 230 240 250
LGIARQRQAI VDGLRDSVLG FAGNVPGTSA KDVLDMVMMT QYFDTMRDIG
260 270 280
ATSKSSAVFI PHGPGAVSDV AAQIRNGLLQ ANNAS
Length:285
Mass (Da):31,321
Last modified:May 1, 2000 - v1
Checksum:i57A46F2A29CFB74C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC008261 Genomic DNA Translation: AAF26146.1
AC010676 Genomic DNA Translation: AAF03497.1
CP002686 Genomic DNA Translation: AEE73633.1
BT024707 mRNA Translation: ABD59045.1
AY084426 mRNA Translation: AAM61000.1
RefSeqiNP_566135.1, NM_110995.3
UniGeneiAt.43760

Genome annotation databases

EnsemblPlantsiAT3G01290.1; AT3G01290.1; AT3G01290
GeneIDi821309
GrameneiAT3G01290.1; AT3G01290.1; AT3G01290
KEGGiath:AT3G01290

Similar proteinsi

Entry informationi

Entry nameiHIR3_ARATH
AccessioniPrimary (citable) accession number: Q9SRH6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 5, 2010
Last sequence update: May 1, 2000
Last modified: April 25, 2018
This is version 97 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names

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