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Reviewed, UniProtKB/Swiss-Prot Q9SR86 (AGT23_ARATH)

Last modified November 3, 2009. Version 55. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

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Names and origin

Protein namesRecommended name:
    Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial
    EC=2.6.1.44
Alternative name(s):
    Beta-alanine-pyruvate aminotransferase 3
Gene names
Ordered Locus Names: At3g08860
ORF Names: T16O11.21
OrganismArabidopsis thaliana (Mouse-ear cress) [Complete proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Arabidopsis

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Protein attributes

Sequence length481 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level.

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General annotation (Comments)

Catalytic activity

L-alanine + glyoxylate = pyruvate + glycine.

Cofactor

Pyridoxal phosphate.

Subunit structure

Homotetramer By similarity.

Subcellular location

Mitochondrion Potential.

Sequence similarities

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.

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Ontologies

Keywords
   Biological processPhotorespiration
   Cellular componentMitochondrion
   DomainTransit peptide
   LigandPyridoxal phosphate
   Molecular functionAminotransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processphotorespiration

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular componentmitochondrion

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionalanine-glyoxylate transaminase activity

Inferred from electronic annotation. Source: EC

pyridoxal phosphate binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Transit peptide1 – 3131Mitochondrion Potential
Chain32 – 481450Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial
PRO_0000041947

Amino acid modifications

Modified residue3251N6-(pyridoxal phosphate)lysine By similarity

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Sequences

Sequence LengthMass (Da)Tools
Q9SR86-1 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 31E78C568A84E60C

FASTA48152,461
        10         20         30         40         50         60 
MRKLTAVNSL LKRNNYLLPR HGSSQTAAQR TSSVRETETE TKLPKMPPFN YSPPPYDGPS 

        70         80         90        100        110        120 
TAEIIAKRRE FLSPALFHFY NTPLNIVEAK MQYVFDENGR RYLDAFGGIA TVSCGHCHPE 

       130        140        150        160        170        180 
VVNSVVKQLK LINHSTILYL NHTISDFAEA LVSTLPGDLK VVFFTNSGTE ANELAMMMAR 

       190        200        210        220        230        240 
LYTGCNDIVS LRNSYHGNAA ATMGATAQSN WKFNVVQSGV HHAINPDPYR GIFGSDGEKY 

       250        260        270        280        290        300 
ASDVHDLIQF GTSGQVAGFI GESIQGVGGI VELAPGYLPA AYDIVRKAGG VCIADEVQSG 

       310        320        330        340        350        360 
FARTGTHFWG FQSHGVIPDI VTMAKGIGNG IPLGAVVTTP EIAGVLSRRS YFNTFGGNPM 

       370        380        390        400        410        420 
CTAAGHAVLR VLHEEKLQEN ANLVGSHLKR RLTLLKNKYE LIGDVRGRGL MLGVEFVKDR 

       430        440        450        460        470        480 
DLKTPAKAET LHLMDQMKEM GVLVGKGGFY GNVFRITPPL CFTLSDADFL VDVMDHAMSK 


M

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References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana."
Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B., Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N., Artiguenave F. expand/collapse author list , Robert C., Brottier P., Wincker P., Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H., Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A., Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H., Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J., Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B., Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D., de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E., Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G., Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X., Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M., Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B., Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J., Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C., Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y., Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K., Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
Nature 408:820-822(2000) [PubMed: 11130713] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]"Empirical analysis of transcriptional activity in the Arabidopsis genome."
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. expand/collapse author list , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
Science 302:842-846(2003) [PubMed: 14593172] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Columbia.
[3]"Alanine aminotransferase homologs catalyze the glutamate:glyoxylate aminotransferase reaction in peroxisomes of Arabidopsis."
Liepman A.H., Olsen L.J.
Plant Physiol. 131:215-227(2003) [PubMed: 12529529] [Abstract]
Cited for: IDENTIFICATION.
+Additional computationally mapped references.

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Cross-references

Sequence databases

AC010871 Genomic DNA. Translation: AAF07846.1.
AY099816 mRNA. Translation: AAM20667.1.
IPIIPI00525395.
RefSeqNP_187498.1.
UniGeneAt.19925

3D structure databases

HSSPHSSP built from PDB template 1M0Q based on UniProtKB P16932.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ9SR86.

Proteomic databases

PRIDEQ9SR86.

Genome annotation databases

GeneID820034.
GenomeReviewsGene locus AT3G08860 in contig BA000014_GR.
KEGGath:AT3G08860.
NMPDRfig|3702.1.peg.12890.

Organism-specific databases

GeneFarm5079. 483.
TAIRAt3g08860.

Phylogenomic databases

OMANSYHGNA.

Enzyme and pathway databases

BRENDA2.6.1.44. 302.

Gene expression databases

ArrayExpressQ9SR86.
GenevestigatorQ9SR86.
GermOnlineAT3G08860. Arabidopsis thaliana.

Family and domain databases

InterProIPR005814. Aminotrans_3.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
Gene3DG3DSA:3.40.640.10. PyrdxlP-dep_Trfase_major_sub1. 1 hit.
PANTHERPTHR11986. Aminotrans_3. 1 hit.
PfamPF00202. Aminotran_3. 1 hit.
[Graphical view]
PROSITEPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetSearch...

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Entry information

Entry nameAGT23_ARATH
AccessionPrimary (citable) accession number: Q9SR86
Entry history
Integrated into UniProtKB/Swiss-Prot: September 13, 2005
Last sequence update: May 1, 2000
Last modified: November 3, 2009
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectPPAP (Plant Proteome Annotation Project)

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Relevant documents

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents