Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Tubby-like F-box protein 9

Gene

TULP9

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins. Confers sensitivity to ABA during seed germination and early seedling development.1 Publication

Pathwayi: protein ubiquitination

This protein is involved in the pathway protein ubiquitination, which is part of Protein modification.
View all proteins of this organism that are known to be involved in the pathway protein ubiquitination and in Protein modification.

GO - Molecular functioni

  • DNA binding transcription factor activity Source: TAIR
  • phosphatidylinositol binding Source: GO_Central

GO - Biological processi

  • abscisic acid-activated signaling pathway Source: UniProtKB-KW
  • protein ubiquitination Source: UniProtKB-UniPathway
  • regulation of transcription, DNA-templated Source: TAIR
  • response to fungus Source: TAIR

Keywordsi

Biological processAbscisic acid signaling pathway, Ubl conjugation pathway

Enzyme and pathway databases

UniPathwayiUPA00143

Names & Taxonomyi

Protein namesi
Recommended name:
Tubby-like F-box protein 9
Short name:
AtTLP9
Gene namesi
Name:TULP9
Ordered Locus Names:At3g06380
ORF Names:F24P17.15
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 3

Organism-specific databases

AraportiAT3G06380
TAIRilocus:2081101 AT3G06380

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002722371 – 380Tubby-like F-box protein 9Add BLAST380

Proteomic databases

PaxDbiQ9SQU1
PRIDEiQ9SQU1

Expressioni

Tissue specificityi

Ubiquitous.1 Publication

Developmental stagei

Expressed early during seed germination, especially in the preemergent radicle.1 Publication

Inductioni

During imbibition of seeds.1 Publication

Gene expression databases

ExpressionAtlasiQ9SQU1 baseline and differential
GenevisibleiQ9SQU1 AT

Interactioni

Subunit structurei

Part of a SCF (SKP1-cullin-F-box) protein ligase complex. Interacts with SKP1A/ASK1 and XERICO.2 Publications

Protein-protein interaction databases

BioGridi51473 interactors.
IntActiQ9SQU1 4 interactors.
STRINGi3702.AT3G06380.1

Structurei

3D structure databases

ProteinModelPortaliQ9SQU1
SMRiQ9SQU1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini30 – 76F-boxAdd BLAST47

Sequence similaritiesi

Belongs to the TUB family.Curated

Phylogenomic databases

eggNOGiKOG2502 Eukaryota
ENOG410XQFT LUCA
HOGENOMiHOG000238161
InParanoidiQ9SQU1
OMAiFRSHSKP
OrthoDBiEOG09360CFC
PhylomeDBiQ9SQU1

Family and domain databases

Gene3Di3.20.90.101 hit
InterProiView protein in InterPro
IPR036047 F-box-like_dom_sf
IPR001810 F-box_dom
IPR025659 Tubby-like_C
IPR000007 Tubby_C
IPR018066 Tubby_C_CS
PfamiView protein in Pfam
PF00646 F-box, 1 hit
PF01167 Tub, 1 hit
PRINTSiPR01573 SUPERTUBBY
SUPFAMiSSF54518 SSF54518, 1 hit
SSF81383 SSF81383, 1 hit
PROSITEiView protein in PROSITE
PS01200 TUB_1, 1 hit

Sequencei

Sequence statusi: Complete.

Q9SQU1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTFRSLLQEM RSRPHRVVHA AASTANSSDP FSWSELPEEL LREILIRVET
60 70 80 90 100
VDGGDWPSRR NVVACAGVCR SWRILTKEIV AVPEFSSKLT FPISLKQSGP
110 120 130 140 150
RDSLVQCFIK RNRNTQSYHL YLGLTTSLTD NGKFLLAASK LKRATCTDYI
160 170 180 190 200
ISLRSDDISK RSNAYLGRMR SNFLGTKFTV FDGSQTGAAK MQKSRSSNFI
210 220 230 240 250
KVSPRVPQGS YPIAHISYEL NVLGSRGPRR MRCIMDTIPM SIVESRGVVA
260 270 280 290 300
STSISSFSSR SSPVFRSHSK PLRSNSASCS DSGNNLGDPP LVLSNKAPRW
310 320 330 340 350
HEQLRCWCLN FHGRVTVASV KNFQLVAVSD CEAGQTSERI ILQFGKVGKD
360 370 380
MFTMDYGYPI SAFQAFAICL SSFETRIACE
Length:380
Mass (Da):42,310
Last modified:May 1, 2000 - v1
Checksum:iEDB57859F8B5F51D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF487270 mRNA Translation: AAQ06243.1
AC011623 Genomic DNA Translation: AAF08576.1
CP002686 Genomic DNA Translation: AEE74384.1
BT026465 mRNA Translation: ABH04572.1
RefSeqiNP_187289.1, NM_111513.4
UniGeneiAt.46725

Genome annotation databases

EnsemblPlantsiAT3G06380.1; AT3G06380.1; AT3G06380
GeneIDi819812
GrameneiAT3G06380.1; AT3G06380.1; AT3G06380
KEGGiath:AT3G06380

Similar proteinsi

Entry informationi

Entry nameiTLP9_ARATH
AccessioniPrimary (citable) accession number: Q9SQU1
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 23, 2007
Last sequence update: May 1, 2000
Last modified: April 25, 2018
This is version 119 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome