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Q9SQR2 (Q9SQR2_ARATH) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 85. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
3-oxoacyl-[acyl-carrier protein] reductase EMBL AEE74024.1
Submitted name:
Putative short-chain type dehydrogenase/reductase EMBL AAF05859.1
Gene names
Name:T11I18.11 EMBL AAF05859.1
Ordered Locus Names:At3g04000 TAIR At3g04000
ORF Names:AT3G04000 EMBL AEE74024.1
OrganismArabidopsis thaliana (Mouse-ear cress) [Reference proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length272 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Binary interactions

With

Entry

#Exp.

IntAct

Notes

F17N18.70Q9SVQ93EBI-4471202,EBI-4471207

Sequences

Sequence LengthMass (Da)Tools
Q9SQR2 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 1F0542EE7C599276

FASTA27228,435
        10         20         30         40         50         60 
MAAASSVSSP PLCLAGRVAI VTGSSRGIGR AIAIHLAELG ARVVVNYSTS PVEAEKVATA 

        70         80         90        100        110        120 
ITTNCSKDAE VAGKSPRVIV VKADISEPSQ VKSLFDEAER VFESPVHILV NSAAIADPNH 

       130        140        150        160        170        180 
STISDMSVEL FDRIISVNTR GAFICAREAA NRLKRGGGGR IILLSTSLVQ TLNTNYGSYT 

       190        200        210        220        230        240 
ASKAAVEAMA KILAKELKGT EITVNCVSPG PVATEMFYTG LSNEIVEKVK SQNLFGRIGE 

       250        260        270 
TKDIAPVVGF LASDAGEWIN GQVIMANGGC LL

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana."
European Union Chromosome 3 Arabidopsis Sequencing Consortium, Institute for Genomic Research, Kazusa DNA Research Institute
Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B., Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N., Artiguenave F. expand/collapse author list , Robert C., Brottier P., Wincker P., Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H., Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A., Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H., Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J., Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B., Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D., de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E., Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G., Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X., Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M., Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B., Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J., Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C., Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y., Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K., Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
Nature 408:820-822(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]"Arabidopsis thaliana chromosome III BAC T11I18 genomic sequence."
Lin X., Kaul S., Town C.D., Benito M.-I., Creasy T.H., Haas B., Ronning C.M., Koo H., Fujii C.Y., Utterback T.R., Barnstead M.E., Bowman C.L., White O., Nierman W.C., Fraser C.M.
Submitted (JAN-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]"Arabidopsis Open Reading Frame (ORF) Clones."
Yamada K., Chan M.M., Chang C.H., Dale J.M., Hsuan V.W., Lee J.M., Onodera C.S., Quach H.L., Tang C.C., Toriumi M., Wong C., Wu H.C., Yu G., Yuan S., Chen H., Cheuk R., Jones T., Kim C.J. expand/collapse author list , Nguyen M., Palm C.J., Shinn P., Southwick A., Tripp M.G., Wu T., Davis R.W., Ecker J.R., Theologis A.
Submitted (DEC-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[4]Arabidopsis TAIR10 Release
Swarbreck D., Lamesch P., Wilks C., Huala E.
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[5]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Columbia.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AC011698 Genomic DNA. Translation: AAF05859.1.
BT002321 mRNA. Translation: AAN86154.1.
CP002686 Genomic DNA. Translation: AEE74024.1.
IPIIPI00519980.
RefSeqNP_566221.2. NM_111271.2.
UniGeneAt.18595.
At.67194.

3D structure databases

HSSPHSSP built from PDB template 1G0N based on UniProtKB Q12634.
SMRQ9SQR2. Positions 17-271.
ModBaseSearch...

Protein-protein interaction databases

IntActQ9SQR2. 1 interaction.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT3G04000.1; AT3G04000.1; AT3G04000.
GeneID819555.
KEGGath:AT3G04000.

Organism-specific databases

TAIRAt3g04000.

Phylogenomic databases

InParanoidQ9SQR2.
KOK00059.
OMAHVDGGTQ.
ProtClustDBCLSN2684260.

Enzyme and pathway databases

BioCycARA:AT3G04000-MONOMER.
MetaCyc:AT3G04000-MONOMER.

Gene expression databases

GenevestigatorQ9SQR2.

Family and domain databases

Gene3D3.40.50.720. 1 hit.
InterProIPR002198. DH_sc/Rdtase_SDR.
IPR002347. Glc/ribitol_DH.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PRINTSPR00081. GDHRDH.
PR00080. SDRFAMILY.
ProtoNetSearch...

Entry information

Entry nameQ9SQR2_ARATH
AccessionPrimary (citable) accession number: Q9SQR2
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: May 1, 2013
This is version 85 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Interactions·Sequences·References·Cross-refs·Entry info