Unreviewed, UniProtKB/TrEMBL Q9SQF7 (Q9SQF7_BRAJU)

Names and origin

Protein names	Submitted name:     Chitinase EMBL AAF02299.1
Organism	Brassica juncea (Leaf mustard) (Indian mustard) EMBL AAF02299.1
Taxonomic identifier	3707 [NCBI]
Taxonomic lineage	Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Brassica

Protein attributes

Sequence length	400 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

General annotation (Comments)

Sequence similarities

Contains 2 chitin-binding type-1 domains. RuleBase RU000410V1

Ontologies

Keywords
Ligand	Chitin-binding RuleBase RU000410V1 Spearmint SPM018371
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro chitin catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	chitin binding Inferred from electronic annotation. Source: InterPro chitinase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9SQF7-1 [UniParc]. Last modified May 1, 2000. Version 1. Checksum: 1EABEA99C439C4B1	FASTA	400	42,774
	10 20 30 40 50 60 MKTYLLLLLI FSLLLSFSSG EQCGSQSIPE GALCPNGLCC SEAGWCGTTE AYCGHGCQSQ 70 80 90 100 110 120 CNPGPYPPPP TPQCGRQSIP AGALCPNGLC CSEAGWCGTT EAYCGHGCQS QCTPIPTPPA 130 140 150 160 170 180 PTPTPPTPTP PSPTPPGPTP PGPSGDLSGI ISRDQFYKML KHMNDNDCHA VGFFTYDAFI 190 200 210 220 230 240 TAAKSFPSFG NTGDLAMRKK EIAAFFGQTS HETTGGWSGA PDGANTWGYC YKEEIDKSDP 250 260 270 280 290 300 HCDSNNLEWP CAPGKFYYGR GPMMLSWNYN YGPCGRDLGL ELLKNPDVAS SDPVIAFKTA 310 320 330 340 350 360 IWFWMTPQAP KPSCHDVITD QWEPSAADIS AGRLPGYGVI TNIINGGLEC AGRDVAKVQD 370 380 390 400 RISFYTRYCG MFGVDPGSNI DCDNQRPFNE GSNVFLDAAI

References

[1]	"Methyl jasmonate induces expression of a novel Brassica juncea chitinase with two chitin-binding domains." Zhao K.J., Chye M.L. Plant Mol. Biol. 40:1009-1018(1999) [PubMed: 10527425] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	Zhao K.-J., Chye M.-L. Submitted (OCT-1998) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
+	Additional computationally mapped references.

Cross-references

Sequence databases

EMBLGenBankDDBJ

AF098302 mRNA. Translation: AAF02299.1.

3D structure databases

PDBPDBe

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
2Z37	X-ray	1.53	A/B/C/D	146-389	[»]
2Z38	X-ray	1.80	A	145-389	[»]
2Z39	X-ray	1.70	A/B	146-389	[»]

ModBase

Search...

Protein family/group databases

CAZy

CBM18. Carbohydrate-Binding Module Family 18.
GH19. Glycoside Hydrolase Family 19.

Family and domain databases

InterPro

IPR018371. Chitin-binding_1_CS.
IPR001002. Chitin_bd_1.
IPR000726. Glyco_hydro_19_cat.
[Graphical view]

Gene3D

G3DSA:3.30.60.10. Chitin_bd_1. 2 hits.

PANTHER

PTHR22595. Glyco_hydro_19_cat. 1 hit.

Pfam

PF00187. Chitin_bind_1. 2 hits.
PF00182. Glyco_hydro_19. 1 hit.
[Graphical view]

PRINTS

PR00451. CHITINBINDNG.

ProDom

PD000609. Chitin_binding_1. 2 hits.
PD354900. Glyco_hydro_19. 1 hit.
[Graphical view] [Entries sharing at least one domain]

SMART

SM00270. ChtBD1. 2 hits.
[Graphical view]

PROSITE

PS00026. CHIT_BIND_I_1. 2 hits.
PS50941. CHIT_BIND_I_2. 2 hits.
PS00774. CHITINASE_19_2. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

Q9SQF7_BRAJU

Accession

Primary (citable) accession number: Q9SQF7

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	May 1, 2000
Last modified:	June 16, 2009
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)