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Q9SLP6 (Q9SLP6_MAIZE) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 93. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Ferredoxin--NADP reductase, leaf isozyme EMBL ACG31602.1

FerredoxinFerredoxin--NADP reductase, leaf isozyme EMBL AFW86197.1

Uncharacterized protein EMBL ACL53609.1
Gene names
Name:L-FNRI EMBL BAA88236.1
ORF Names:ZEAMMB73_116832 EMBL AFW86197.1
OrganismZea mays (Maize) [Reference proteome] EMBL BAA88236.1
Taxonomic identifier4577 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeZea

Protein attributes

Sequence length355 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding134 – 1374FAD PDB 1GAQ PDB 3W5V PDB 3W5U PDB 1GAW
Nucleotide binding155 – 1573FAD PDB 1GAQ PDB 3W5V PDB 3W5U PDB 1GAW
Nucleotide binding171 – 1744FAD PDB 1GAQ PDB 3W5V PDB 3W5U PDB 1GAW

Sites

Binding site1611FAD PDB 1GAQ PDB 3W5V PDB 3W5U PDB 1GAW
Binding site2131FAD PDB 1GAQ PDB 3W5V PDB 3W5U
Binding site3551FAD PDB 1GAQ PDB 3W5V PDB 3W5U PDB 1GAW

Sequences

Sequence LengthMass (Da)Tools
Q9SLP6 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: AE56B6A6BF471267

FASTA35539,323
        10         20         30         40         50         60 
MATVMAAAVS SFPSSSAVVA KASPASPCAA PHFRPRAVRA AIRAQASAVE APATAKAKKE 

        70         80         90        100        110        120 
SKKQEEGVVT NLYKPKEPYV GRCLLNTKIT GDDAPGETWH MVFSTEGKIP YREGQSIGVI 

       130        140        150        160        170        180 
ADGVDKNGKP HKVRLYSIAS SAIGDFGDSK TVSLCVKRLI YTNDAGEIVK GVCSNFLCDL 

       190        200        210        220        230        240 
QPGDNVQITG PVGKEMLMPK DPNATIIMLA TGTGIAPFRS FLWKMFFEKH DDYKFNGLGW 

       250        260        270        280        290        300 
LFLGVPTSSS LLYKEEFGKM KERAPENFRV DYAVSREQTN AAGERMYIQT RMAEYKEELW 

       310        320        330        340        350 
ELLKKDNTYV YMCGLKGMEK GIDDIMVSLA EKDGIDWFDY KKQLKRGDQW NVEVY 

« Hide

References

« Hide 'large scale' references
[1]"Differential interaction of maize root ferredoxin:NADP(+) oxidoreductase with photosynthetic and non-photosynthetic ferredoxin isoproteins."
Onda Y., Matsumura T., Kimata-Ariga Y., Sakakibara H., Sugiyama T., Hase T.
Plant Physiol. 123:1037-1045(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Leaf EMBL BAA88236.1.
[2]"Structure of the electron transfer complex between ferredoxin and ferredoxin-NADP+ reductase."
Kurisu G., Kusunoki M., Katoh E., Yamazaki T., Teshima K., Onda Y., Kimata-Ariga Y., Hase T.
Nat. Struct. Biol. 8:117-121(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.20 ANGSTROMS) OF 42-355 IN COMPLEX WITH FAD.
[3]"Insights into corn genes derived from large-scale cDNA sequencing."
Alexandrov N.N., Brover V.V., Freidin S., Troukhan M.E., Tatarinova T.V., Zhang H., Swaller T.J., Lu Y.-P., Bouck J., Flavell R.B., Feldmann K.A.
Plant Mol. Biol. 69:179-194(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[4]"Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs."
Soderlund C., Descour A., Kudrna D., Bomhoff M., Boyd L., Currie J., Angelova A., Collura K., Wissotski M., Ashley E., Morrow D., Fernandes J., Walbot V., Yu Y.
PLoS Genet. 5:E1000740-E1000740(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: B73 EMBL ACL53609.1.
[5]"The B73 maize genome: complexity, diversity, and dynamics."
Schnable P.S., Ware D., Fulton R.S., Stein J.C., Wei F., Pasternak S., Liang C., Zhang J., Fulton L., Graves T.A., Minx P., Reily A.D., Courtney L., Kruchowski S.S., Tomlinson C., Strong C., Delehaunty K., Fronick C. expand/collapse author list , Courtney B., Rock S.M., Belter E., Du F., Kim K., Abbott R.M., Cotton M., Levy A., Marchetto P., Ochoa K., Jackson S.M., Gillam B., Chen W., Yan L., Higginbotham J., Cardenas M., Waligorski J., Applebaum E., Phelps L., Falcone J., Kanchi K., Thane T., Scimone A., Thane N., Henke J., Wang T., Ruppert J., Shah N., Rotter K., Hodges J., Ingenthron E., Cordes M., Kohlberg S., Sgro J., Delgado B., Mead K., Chinwalla A., Leonard S., Crouse K., Collura K., Kudrna D., Currie J., He R., Angelova A., Rajasekar S., Mueller T., Lomeli R., Scara G., Ko A., Delaney K., Wissotski M., Lopez G., Campos D., Braidotti M., Ashley E., Golser W., Kim H., Lee S., Lin J., Dujmic Z., Kim W., Talag J., Zuccolo A., Fan C., Sebastian A., Kramer M., Spiegel L., Nascimento L., Zutavern T., Miller B., Ambroise C., Muller S., Spooner W., Narechania A., Ren L., Wei S., Kumari S., Faga B., Levy M.J., McMahan L., Van Buren P., Vaughn M.W., Ying K., Yeh C.-T., Emrich S.J., Jia Y., Kalyanaraman A., Hsia A.-P., Barbazuk W.B., Baucom R.S., Brutnell T.P., Carpita N.C., Chaparro C., Chia J.-M., Deragon J.-M., Estill J.C., Fu Y., Jeddeloh J.A., Han Y., Lee H., Li P., Lisch D.R., Liu S., Liu Z., Nagel D.H., McCann M.C., SanMiguel P., Myers A.M., Nettleton D., Nguyen J., Penning B.W., Ponnala L., Schneider K.L., Schwartz D.C., Sharma A., Soderlund C., Springer N.M., Sun Q., Wang H., Waterman M., Westerman R., Wolfgruber T.K., Yang L., Yu Y., Zhang L., Zhou S., Zhu Q., Bennetzen J.L., Dawe R.K., Jiang J., Jiang N., Presting G.G., Wessler S.R., Aluru S., Martienssen R.A., Clifton S.W., McCombie W.R., Wing R.A., Wilson R.K.
Science 326:1112-1115(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. B73.
[6]"Concentration-dependent oligomerization of cross-linked complexes between ferredoxin and ferredoxin-NADP+ reductase."
Kimata-Ariga Y., Kubota-Kawai H., Lee Y.H., Muraki N., Ikegami T., Kurisu G., Hase T.
Biochem. Biophys. Res. Commun. 434:867-872(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.70 ANGSTROMS) OF 42-355 IN COMPLEX WITH FAD.
[7]Maize Genome Sequencing Project
Submitted (FEB-2013) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
EU959484 mRNA. Translation: ACG31602.1.
BT055002 mRNA. Translation: ACL53609.1.
CM000785 Genomic DNA. Translation: AFW86197.1.
AB035644 mRNA. Translation: BAA88236.1.
RefSeqNP_001105568.1. NM_001112098.1.
UniGeneZm.94506.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1GAQX-ray2.59A/C42-355[»]
1GAWX-ray2.20A/B42-355[»]
3W5UX-ray2.70A/C/E/G42-355[»]
3W5VX-ray3.81A/C42-355[»]
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID542558.
KEGGzma:542558.

Phylogenomic databases

HOGENOMHOG000220125.
KOK02641.
OMAIYICGLK.

Family and domain databases

InterProIPR017927. Fd_Rdtase_FAD-bd.
IPR001709. Flavoprot_Pyr_Nucl_cyt_Rdtase.
IPR015701. FNR.
IPR008333. OxRdtase_FAD-bd_dom.
IPR001433. OxRdtase_FAD/NAD-bd.
IPR017938. Riboflavin_synthase-like_b-brl.
[Graphical view]
PfamPF00970. FAD_binding_6. 1 hit.
PF00175. NAD_binding_1. 1 hit.
[Graphical view]
PIRSFPIRSF000361. Frd-NADP+_RD. 1 hit.
PRINTSPR00371. FPNCR.
SUPFAMSSF63380. SSF63380. 1 hit.
PROSITEPS51384. FAD_FR. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceQ9SLP6.

Entry information

Entry nameQ9SLP6_MAIZE
AccessionPrimary (citable) accession number: Q9SLP6
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: July 9, 2014
This is version 93 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)