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Protein
Submitted name:

Leucine-rich repeat protein kinase family protein

Gene

LRR-RLK

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

KinaseImported, ReceptorImported, Transferase

Enzyme and pathway databases

BioCyciARA:AT2G42290-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Leucine-rich repeat protein kinase family proteinImported
Submitted name:
Leucine-rich repeat receptor-like protein kinaseImported
Submitted name:
Putative receptor-like protein kinaseImported
Gene namesi
Name:LRR-RLKImported
Ordered Locus Names:At2g42290Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

TAIRiAT2G42290.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2323Sequence analysisAdd
BLAST
Chaini24 – 646623Sequence analysisPRO_5006752374Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi3702.AT2G42290.1.

Structurei

3D structure databases

SMRiQ9SLD0. Positions 25-238, 337-646.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini345 – 642298Protein kinaseInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains protein kinase domain.SAAS annotation

Keywords - Domaini

Leucine-rich repeatSAAS annotation, RepeatSAAS annotation, SignalSequence analysis, Transmembrane, Transmembrane helixSAAS annotation

Phylogenomic databases

eggNOGiENOG410IE51. Eukaryota.
ENOG410YF7E. LUCA.
HOGENOMiHOG000116554.
OMAiTWRFKDF.
PhylomeDBiQ9SLD0.

Family and domain databases

Gene3Di3.80.10.10. 1 hit.
InterProiIPR011009. Kinase-like_dom.
IPR032675. L_dom-like.
IPR001611. Leu-rich_rpt.
IPR013210. LRR_N_plant-typ.
IPR000719. Prot_kinase_dom.
[Graphical view]
PfamiPF00560. LRR_1. 1 hit.
PF08263. LRRNT_2. 1 hit.
PF00069. Pkinase. 1 hit.
[Graphical view]
SUPFAMiSSF52058. SSF52058. 1 hit.
SSF56112. SSF56112. 1 hit.
PROSITEiPS50011. PROTEIN_KINASE_DOM. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9SLD0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLPSILSLV VSSIFLCMSF CSSLNSDGLS LLALKSAVDN DPTRVMTHWS
60 70 80 90 100
ESDPTPCHWS GIVCTNGRVT TLVLFGKSLS GYIPSELGLL NSLNRLDLAH
110 120 130 140 150
NNFSKTIPVR LFEATKLRYI DLSHNSLSGP IPAQIKSMKS LNHLDFSSNH
160 170 180 190 200
LNGSLPESLT ELGSLVGTLN FSFNQFTGEI PPSYGRFRVH VSLDFSHNNL
210 220 230 240 250
TGKVPQVGSL LNQGPNAFAG NSHLCGFPLQ TPCEKIKTPN FVAAKPEGTQ
260 270 280 290 300
ELQKPNPSVI SNDDAKEKKQ QITGSVTVSL ISGVSVVIGA VSLSVWLIRR
310 320 330 340 350
KRSSDGYNSE TKTTTVVSEF DEEGQEGKFV AFDEGFELEL EDLLRASAYV
360 370 380 390 400
IGKSRSGIVY RVVAAESSST VVAVRRLSDG NDTWRFKDFV NEVESIGRIN
410 420 430 440 450
HPNIVRLRAY YYAEDEKLLI TDFINNGSLY SALHGGPSNT RPTLSWAERL
460 470 480 490 500
CIAQGTARGL MYIHEYSSRK YVHGNLKSSK ILLDNELHPH VSGFGLTRLV
510 520 530 540 550
SGYPKVTDHS LSSMTQSIDQ GFATRLSVSA PAAAYLAPEA RASSDCKLSH
560 570 580 590 600
KCDVYSFGVI LLELLTGRLP YGSSENEGEE ELVNVLRKWH KEERSLAEIL
610 620 630 640
DPKLLKQDFA NKQVIATIHV ALNCTEMDPD MRPRMRSVSE ILGRIK
Length:646
Mass (Da):71,073
Last modified:May 1, 2000 - v1
Checksum:iE25FA28D3C3DCAE4
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei646 – 6461Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC005956 Genomic DNA. Translation: AAD23712.1.
FJ708713 mRNA. Translation: ACN59308.1.
CP002685 Genomic DNA. Translation: AEC10101.1.
PIRiB84852.
T00938.
RefSeqiNP_181758.1. NM_129791.2.
UniGeneiAt.42729.

Genome annotation databases

EnsemblPlantsiAT2G42290.1; AT2G42290.1; AT2G42290.
GeneIDi818830.
GrameneiAT2G42290.1; AT2G42290.1; AT2G42290.
KEGGiath:AT2G42290.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC005956 Genomic DNA. Translation: AAD23712.1.
FJ708713 mRNA. Translation: ACN59308.1.
CP002685 Genomic DNA. Translation: AEC10101.1.
PIRiB84852.
T00938.
RefSeqiNP_181758.1. NM_129791.2.
UniGeneiAt.42729.

3D structure databases

SMRiQ9SLD0. Positions 25-238, 337-646.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT2G42290.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT2G42290.1; AT2G42290.1; AT2G42290.
GeneIDi818830.
GrameneiAT2G42290.1; AT2G42290.1; AT2G42290.
KEGGiath:AT2G42290.

Organism-specific databases

TAIRiAT2G42290.

Phylogenomic databases

eggNOGiENOG410IE51. Eukaryota.
ENOG410YF7E. LUCA.
HOGENOMiHOG000116554.
OMAiTWRFKDF.
PhylomeDBiQ9SLD0.

Enzyme and pathway databases

BioCyciARA:AT2G42290-MONOMER.

Family and domain databases

Gene3Di3.80.10.10. 1 hit.
InterProiIPR011009. Kinase-like_dom.
IPR032675. L_dom-like.
IPR001611. Leu-rich_rpt.
IPR013210. LRR_N_plant-typ.
IPR000719. Prot_kinase_dom.
[Graphical view]
PfamiPF00560. LRR_1. 1 hit.
PF08263. LRRNT_2. 1 hit.
PF00069. Pkinase. 1 hit.
[Graphical view]
SUPFAMiSSF52058. SSF52058. 1 hit.
SSF56112. SSF56112. 1 hit.
PROSITEiPS50011. PROTEIN_KINASE_DOM. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. ColumbiaImported.
  2. Cited for: NUCLEOTIDE SEQUENCE.
  3. Town C.D., Kaul S.
    Submitted (FEB-2002) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  4. "Genome-wide cloning and sequence analysis of leucine-rich repeat receptor-like protein kinase genes in Arabidopsis thaliana."
    Gou X., He K., Yang H., Yuan T., Lin H., Clouse S.D., Li J.
    BMC Genomics 11:19-19(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  5. TAIR
    Swarbreck D., Lamesch P., Wilks C., Huala E.
    Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  6. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. ColumbiaImported.

Entry informationi

Entry nameiQ9SLD0_ARATH
AccessioniPrimary (citable) accession number: Q9SLD0
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: April 13, 2016
This is version 117 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.