Unreviewed,
UniProtKB/TrEMBL Q9SKN2 (Q9SKN2_ARATH)
Last modified
June 16, 2009.
Version 46.
History...
Clusters with 100%,
90%,
50% identity |
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Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information
Names and origin
| Protein names | Submitted name: Expressed protein EMBL AAD20688.1 Submitted name: Putative uncharacterized protein At2g28380 EMBL AAL33811.1 | ||
| Gene names |
| ||
| Organism | Arabidopsis thaliana (Mouse-ear cress) [Complete proteome] | ||
| Taxonomic identifier | 3702 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Arabidopsis |
Protein attributes
| Sequence length | 434 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at transcript level. |
Ontologies
| Keywords | |
|---|---|
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Cellular component | cytoplasm Inferred from direct assay. Source: TAIR |
| Molecular function | double-stranded RNA binding Inferred from electronic annotation. Source: InterPro protein bindingInferred from physical interaction. Source: IntAct |
| Complete GO annotation... | |
Sequences
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References
| [1] | Lin X., Kaul S., Shea T.P., Fujii C.Y., Shen M., VanAken S.E., Barnstead M.E., Mason T.M., Bowman C.L., Ronning C.M., Benito M.-I., Carrera A.J., Creasy T.H., Buell C.R., Town C.D., Nierman W.C., Fraser C.M., Venter J.C. Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [2] | Town C.D., Kaul S. Submitted (FEB-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [3] | "Arabidopsis Open Reading Frame (ORF) Clones." Yamada K., Liu S.X., Sakano H., Pham P.K., Banh J., Etgu P., Lee J.M., Toriumi M., Yu G., Brooks S., Chao Q., Chen H., Karlin-Neumann G., Kim C., Lam B., Miranda M., Nguyen M., Palm C.J. Theologis A.Submitted (NOV-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [4] | "Arabidopsis Full Length cDNA Clones." Yamada K., Liu S.X., Sakano H., Pham P.K., Banh J., Chung M.K., Goldsmith A.D., Lee J.M., Quach H.L., Toriumi M., Yu G., Bowser L., Carninci P., Chen H., Cheuk R., Hayashizaki Y., Ishida J., Jones T. Theologis A.Submitted (MAY-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
Cross-references
Sequence databases | |
|---|---|
| AC006283 Genomic DNA. Translation: AAD20688.1. AY034976 mRNA. Translation: AAK59481.1. AY062965 mRNA. Translation: AAL33811.1. | |
| IPI | IPI00547657. |
| PIR | B84684. |
| RefSeq | NP_565672.1. |
| UniGene | At.13732 |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q9SKN2. 7 interactions. |
Genome annotation databases | |
| GeneID | 817386. |
| GenomeReviews | Gene locus AT2G28380 in contig CT485783_GR. |
| KEGG | ath:AT2G28380. |
| NMPDR | fig|3702.1.peg.9889. |
Organism-specific databases | |
| TAIR | At2g28380. |
Phylogenomic databases | |
| OMA | Q9SKN2. FTGDPAK. |
Gene expression databases | |
| ArrayExpress | Q9SKN2. |
Family and domain databases | |
| InterPro | IPR001159. Ds-RNA_bd. IPR014720. dsRNA-bd-like. [Graphical view] |
| Gene3D | G3DSA:3.30.160.20. dsRNA-bd-like. 2 hits. |
| Pfam | PF00035. dsrm. 2 hits. [Graphical view] |
| SMART | SM00358. DSRM. 2 hits. [Graphical view] |
| PROSITE | PS50137. DS_RBD. 2 hits. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | Q9SKN2_ARATH | ||||||||
| Accession | Primary (citable) accession number: Q9SKN2 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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