Unreviewed, UniProtKB/TrEMBL Q9SJX8 (Q9SJX8_ARATH)

Names and origin

Protein names

Submitted name:
    At2g31180 EMBL ABD60736.1
Submitted name:
    MYB transcription factor EMBL AAS10045.1
    Myb DNA-binding protein EMBL AAM15030.1
    Myb family transcription factor EMBL AAD20663.1

Gene names

Ordered Locus Names:

At2g31180 EMBL AAD20663.1 TAIR At2g31180

Organism

Arabidopsis thaliana (Mouse-ear cress) [Complete proteome]

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Arabidopsis

Protein attributes

Sequence length	249 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

Ontologies

Keywords
Cellular component	Nucleus Spearmint SPM001005
Domain	Repeat Spearmint SPM001005
Ligand	DNA-binding Spearmint SPM001005
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	regulation of transcription Inferred from electronic annotation. Source: InterPro response to auxin stimulus Inferred from expression pattern. Source: TAIR response to ethylene stimulus Inferred from expression pattern. Source: TAIR response to jasmonic acid stimulus Inferred from expression pattern. Source: TAIR response to salicylic acid stimulus Inferred from expression pattern. Source: TAIR response to salt stress Inferred from expression pattern. Source: TAIR
Cellular component	nucleus Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	DNA binding Inferred from electronic annotation. Source: InterPro protein binding Inferred from physical interaction. Source: IntAct
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9SJX8-1 [UniParc]. Last modified May 1, 2000. Version 1. Checksum: 91AE28FF0414EE81	FASTA	249	28,769
	10 20 30 40 50 60 MGRAPCCEKM GVKRGPWTPE EDQILINYIH LYGHSNWRAL PKHAGLLRCG KSCRLRWINY 70 80 90 100 110 120 LRPDIKRGNF TPQEEQTIIN LHESLGNRWS AIAAKLPGRT DNEIKNVWHT HLKKRLSKNL 130 140 150 160 170 180 NNGGDTKDVN GINETTNEDK GSVIVDTASL QQFSNSITTF DISNDNKDDI MSYEDISALI 190 200 210 220 230 240 DDSFWSDVIS VDNSNKNEKK IEDWEGLIDR NSKKCSYSNS KLYNDDMEFW FDVFTSNRRI EEFSDIPEF

References

[1]	Lin X., Kaul S., Shea T.P., Fujii C.Y., Shen M., VanAken S.E., Barnstead M.E., Mason T.M., Bowman C.L., Ronning C.M., Benito M.-I., Carrera A.J., Creasy T.H., Buell C.R., Town C.D., Nierman W.C., Fraser C.M., Venter J.C. Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[2]	Town C.D., Kaul S. Submitted (FEB-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[3]	"Arabidopsis ORF clones." Kim C.J., Chen H., Shinn P., Ecker J.R. Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[4]	"The MYB Transcription Factor Family in Arabidopsis: A Genome-Wide Cloning and Expression Pattern Analysis." Qu L., Gu H. Submitted (JAN-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[5]	Rounsley S.D., Lin X., Kaul S., Shea T.P., Fujii C.Y., Mason T.M., Shen M., Ronning C.M., Fraser C.M., Somerville C.R., Venter J.C. Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AC006593 Genomic DNA. Translation: AAD20663.1. AC005311 Genomic DNA. Translation: AAM15030.1. AY519575 mRNA. Translation: AAS10045.1. BT024853 mRNA. Translation: ABD60736.1.
IPI	IPI00534394.
PIR	E84717.
RefSeq	NP_180676.1.
UniGene	At.10900
3D structure databases
HSSP	HSSP built from PDB template 1GVD based on UniProtKB P06876.
ModBase	Search...
Protein-protein interaction databases
IntAct	Q9SJX8. 8 interactions.
Genome annotation databases
GeneID	817674.
KEGG	ath:AT2G31180.
NMPDR	fig|3702.1.peg.28987.
Organism-specific databases
TAIR	At2g31180.
Gene expression databases
ArrayExpress	Q9SJX8.
Family and domain databases
InterPro	IPR012287. Homeodomain-rel. IPR017930. Myb-type_HTH. IPR014778. Myb_DNA-bd. IPR015495. Myb_trans_fac. IPR001005. SANT_DNA-bd. [Graphical view]
Gene3D	G3DSA:1.10.10.60. Homeodomain-rel. 2 hits.
PANTHER	PTHR10641. Myb_transfac. 1 hit.
Pfam	PF00249. Myb_DNA-binding. 2 hits. [Graphical view]
SMART	SM00717. SANT. 2 hits. [Graphical view]
PROSITE	PS51294. HTH_MYB. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9SJX8_ARATH

Accession

Primary (citable) accession number: Q9SJX8

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	May 1, 2000
Last modified:	May 5, 2009
This is version 59 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)