ID Q9SJV0_ARATH Unreviewed; 319 AA. AC Q9SJV0; DT 01-MAY-2000, integrated into UniProtKB/TrEMBL. DT 01-JUN-2002, sequence version 2. DT 27-MAR-2024, entry version 146. DE SubName: Full=At2g21270 {ECO:0000313|EMBL:ACF28395.1}; DE SubName: Full=Putative ubiquitin fusion-degradation protein {ECO:0000313|EMBL:AAD23675.2}; DE SubName: Full=Ubiquitin fusion degradation 1 {ECO:0000313|EMBL:AEC07152.1}; GN Name=UFD1 {ECO:0000313|EMBL:AEC07152.1, ECO:0000313|TAIR:AT2G21270}; GN Synonyms=ubiquitin fusion degradation 1 {ECO:0000313|EMBL:AEC07152.1}; GN OrderedLocusNames=At2g21270 {ECO:0000313|Araport:AT2G21270, GN ECO:0000313|EMBL:AEC07152.1}; GN ORFNames=F3K23.3 {ECO:0000313|EMBL:AEC07152.1}, F3K23_3 GN {ECO:0000313|EMBL:AEC07152.1}; OS Arabidopsis thaliana (Mouse-ear cress). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. OX NCBI_TaxID=3702 {ECO:0000313|EMBL:AAD23675.2}; RN [1] {ECO:0000313|EMBL:AEC07152.1, ECO:0000313|Proteomes:UP000006548} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548}; RX PubMed=10617197; DOI=10.1038/45471; RA Lin X., Kaul S., Rounsley S., Shea T.P., Benito M.I., Town C.D., RA Fujii C.Y., Mason T., Bowman C.L., Barnstead M., Feldblyum T.V., RA Buell C.R., Ketchum K.A., Lee J., Ronning C.M., Koo H.L., Moffat K.S., RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J., RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M., RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O., RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.; RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana."; RL Nature 402:761-768(1999). RN [2] {ECO:0000313|EMBL:AAD23675.2} RP NUCLEOTIDE SEQUENCE. RA Lin X., Kaul S., Shea T.P., Fujii C.Y., Shen M., VanAken S.E., RA Barnstead M.E., Mason T.M., Bowman C.L., Ronning C.M., Benito M.-I., RA Carrera A.J., Creasy T.H., Buell C.R., Town C.D., Nierman W.C., RA Fraser C.M., Venter J.C.; RL Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases. RN [3] {ECO:0000313|EMBL:AAD23675.2} RP NUCLEOTIDE SEQUENCE. RA Town C.D., Kaul S.; RL Submitted (FEB-2002) to the EMBL/GenBank/DDBJ databases. RN [4] {ECO:0000313|EMBL:BAE98665.1} RP NUCLEOTIDE SEQUENCE. RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Morosawa T., RA Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., RA Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., RA Akiyama K., Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., RA Hayashizaki Y., Shinozaki K.; RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs."; RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases. RN [5] {ECO:0000313|EMBL:ACF28395.1} RP NUCLEOTIDE SEQUENCE. RA de los Reyes C., Quan R., Chen H., Bautista V., Kim C.J., Ecker J.R.; RT "Arabidopsis ORF clones."; RL Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases. RN [6] {ECO:0000313|EMBL:AEC07152.1} RP NUCLEOTIDE SEQUENCE. RG TAIR; RA Swarbreck D., Lamesch P., Wilks C., Huala E.; RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases. RN [7] {ECO:0000313|EMBL:AEC07152.1} RP NUCLEOTIDE SEQUENCE. RA Krishnakumar V., Cheng C.-Y., Chan A.P., Schobel S., Kim M., Ferlanti E.S., RA Belyaeva I., Rosen B.D., Micklem G., Miller J.R., Vaughn M., Town C.D.; RL Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases. RN [8] {ECO:0000313|Proteomes:UP000006548} RP GENOME REANNOTATION. RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548}; RX PubMed=27862469; DOI=10.1111/tpj.13415; RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S., RA Town C.D.; RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference RT genome."; RL Plant J. 89:789-804(2017). CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; AC006841; AAD23675.2; -; Genomic_DNA. DR EMBL; BT033134; ACF28395.1; -; mRNA. DR EMBL; CP002685; AEC07152.1; -; Genomic_DNA. DR EMBL; CP002685; AEC07153.1; -; Genomic_DNA. DR EMBL; CP002685; ANM61527.1; -; Genomic_DNA. DR EMBL; CP002685; ANM61528.1; -; Genomic_DNA. DR EMBL; AK226526; BAE98665.1; -; mRNA. DR PIR; C84599; C84599. DR RefSeq; NP_001031384.1; NM_001036307.2. DR RefSeq; NP_001323741.1; NM_001335739.1. DR RefSeq; NP_001323742.1; NM_001335738.1. DR RefSeq; NP_565504.1; NM_127699.5. DR SMR; Q9SJV0; -. DR ProteomicsDB; 185734; -. DR EnsemblPlants; AT2G21270.1; AT2G21270.1; AT2G21270. DR EnsemblPlants; AT2G21270.2; AT2G21270.2; AT2G21270. DR EnsemblPlants; AT2G21270.4; AT2G21270.4; AT2G21270. DR EnsemblPlants; AT2G21270.5; AT2G21270.5; AT2G21270. DR GeneID; 816666; -. DR Gramene; AT2G21270.1; AT2G21270.1; AT2G21270. DR Gramene; AT2G21270.2; AT2G21270.2; AT2G21270. DR Gramene; AT2G21270.4; AT2G21270.4; AT2G21270. DR Gramene; AT2G21270.5; AT2G21270.5; AT2G21270. DR Araport; AT2G21270; -. DR TAIR; AT2G21270; UFD1. DR HOGENOM; CLU_037790_0_1_1; -. DR Proteomes; UP000006548; Chromosome 2. DR GO; GO:0050896; P:response to stimulus; IEA:UniProt. DR GO; GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro. DR Gene3D; 3.10.330.10; -; 1. DR Gene3D; 2.40.40.50; Ubiquitin fusion degradation protein UFD1, N-terminal domain; 1. DR InterPro; IPR004854; Ufd1-like. DR InterPro; IPR042299; Ufd1-like_Nn. DR PANTHER; PTHR12555; UBIQUITIN FUSION DEGRADATON PROTEIN 1; 1. DR PANTHER; PTHR12555:SF29; UBIQUITIN-DEPENDENT PROTEOLYTIC PROTEIN-RELATED; 1. DR Pfam; PF03152; UFD1; 1. PE 1: Evidence at protein level; KW Proteomics identification {ECO:0007829|PeptideAtlas:Q9SJV0, KW ECO:0007829|ProteomicsDB:Q9SJV0}; KW Reference proteome {ECO:0000313|Proteomes:UP000006548}. FT REGION 184..319 FT /note="Disordered" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT COMPBIAS 243..266 FT /note="Polar residues" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT COMPBIAS 286..309 FT /note="Basic and acidic residues" FT /evidence="ECO:0000256|SAM:MobiDB-lite" SQ SEQUENCE 319 AA; 35323 MW; 5BE3F96661EE0967 CRC64; MFFDGYHYHG TTFEQSYRCY PASFIDKPQL ESGDKIIMPP SALDRLASLH IDYPMLFELR NAGIERVTHC GVLEFIAEEG MIYMPYWMMQ NLLLQEGDIV RVRNVTLPKG TYVKLQPHTT DFLDISNPKA ILETALRNYS CLTSGDSIMV PYNNKKYFID IVETKPANAI SIIETDCEVD FAPPLDYKEP ERPTAPSAAK GPAKAEEVVD EPEPKFNPFT GSGRRLDGRP LAYEPAPASS SKGKQPVVAN GNGQSSVASS SEKATRAQGK LVFGANGNRA PKEAAPKVGA AKETKKEEQE KKDEPKFQAF SGKKYSLRG //