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Q9SJV0

- Q9SJV0_ARATH

UniProt

Q9SJV0 - Q9SJV0_ARATH

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Protein
Submitted name:

At2g21270

Gene

UFD1

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli

Functioni

GO - Biological processi

  1. ubiquitin-dependent protein catabolic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
At2g21270Imported
Submitted name:
Putative ubiquitin fusion-degradation proteinImported
Submitted name:
Ubiquitin fusion degradation 1Imported
Gene namesi
Name:UFD1Imported
Ordered Locus Names:At2g21270Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 2

Organism-specific databases

TAIRiAT2G21270.

Expressioni

Gene expression databases

ExpressionAtlasiQ9SJV0. baseline and differential.
GenevestigatoriQ9SJV0.

Structurei

3D structure databases

ProteinModelPortaliQ9SJV0.
SMRiQ9SJV0. Positions 13-181.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK14016.
PhylomeDBiQ9SJV0.

Family and domain databases

InterProiIPR004854. UFD1.
[Graphical view]
PANTHERiPTHR12555. PTHR12555. 1 hit.
PfamiPF03152. UFD1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9SJV0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MFFDGYHYHG TTFEQSYRCY PASFIDKPQL ESGDKIIMPP SALDRLASLH
60 70 80 90 100
IDYPMLFELR NAGIERVTHC GVLEFIAEEG MIYMPYWMMQ NLLLQEGDIV
110 120 130 140 150
RVRNVTLPKG TYVKLQPHTT DFLDISNPKA ILETALRNYS CLTSGDSIMV
160 170 180 190 200
PYNNKKYFID IVETKPANAI SIIETDCEVD FAPPLDYKEP ERPTAPSAAK
210 220 230 240 250
GPAKAEEVVD EPEPKFNPFT GSGRRLDGRP LAYEPAPASS SKGKQPVVAN
260 270 280 290 300
GNGQSSVASS SEKATRAQGK LVFGANGNRA PKEAAPKVGA AKETKKEEQE
310
KKDEPKFQAF SGKKYSLRG
Length:319
Mass (Da):35,323
Last modified:June 1, 2002 - v2
Checksum:i5BE3F96661EE0967
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC006841 Genomic DNA. Translation: AAD23675.2.
BT033134 mRNA. Translation: ACF28395.1.
CP002685 Genomic DNA. Translation: AEC07152.1.
CP002685 Genomic DNA. Translation: AEC07153.1.
AK226526 mRNA. Translation: BAE98665.1.
PIRiC84599.
RefSeqiNP_001031384.1. NM_001036307.1.
NP_565504.1. NM_127699.4.
UniGeneiAt.39582.

Genome annotation databases

EnsemblPlantsiAT2G21270.1; AT2G21270.1; AT2G21270.
AT2G21270.2; AT2G21270.2; AT2G21270.
GeneIDi816666.
KEGGiath:AT2G21270.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC006841 Genomic DNA. Translation: AAD23675.2 .
BT033134 mRNA. Translation: ACF28395.1 .
CP002685 Genomic DNA. Translation: AEC07152.1 .
CP002685 Genomic DNA. Translation: AEC07153.1 .
AK226526 mRNA. Translation: BAE98665.1 .
PIRi C84599.
RefSeqi NP_001031384.1. NM_001036307.1.
NP_565504.1. NM_127699.4.
UniGenei At.39582.

3D structure databases

ProteinModelPortali Q9SJV0.
SMRi Q9SJV0. Positions 13-181.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT2G21270.1 ; AT2G21270.1 ; AT2G21270 .
AT2G21270.2 ; AT2G21270.2 ; AT2G21270 .
GeneIDi 816666.
KEGGi ath:AT2G21270.

Organism-specific databases

TAIRi AT2G21270.

Phylogenomic databases

KOi K14016.
PhylomeDBi Q9SJV0.

Gene expression databases

ExpressionAtlasi Q9SJV0. baseline and differential.
Genevestigatori Q9SJV0.

Family and domain databases

InterProi IPR004854. UFD1.
[Graphical view ]
PANTHERi PTHR12555. PTHR12555. 1 hit.
Pfami PF03152. UFD1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. ColumbiaImported.
  2. Cited for: NUCLEOTIDE SEQUENCE.
  3. Town C.D., Kaul S.
    Submitted (FEB-2002) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  4. "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs."
    Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Morosawa T., Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K.
    , Akiyama K., Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y., Shinozaki K.
    Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  5. "Arabidopsis ORF clones."
    de los Reyes C., Quan R., Chen H., Bautista V., Kim C.J., Ecker J.R.
    Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  6. TAIR
    Swarbreck D., Lamesch P., Wilks C., Huala E.
    Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  7. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. ColumbiaImported.

Entry informationi

Entry nameiQ9SJV0_ARATH
AccessioniPrimary (citable) accession number: Q9SJV0
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: June 1, 2002
Last modified: October 29, 2014
This is version 83 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3