Probable fucosyltransferase 5 - Arabidopsis thaliana (Mouse-ear cress)

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Q9SJP4 (FUT5_ARATH) Reviewed, UniProtKB/Swiss-Prot

Last modified December 14, 2011. Version 69. History...

Clusters with 100%, 90%, 50% identity |

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Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents Customize order

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Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents Customize order

Names and origin

Protein names

Recommended name:
Probable fucosyltransferase 5
Short name=AtFUT5
EC=2.4.1.-

Gene names

Name:	FUT5
Ordered Locus Names:	At2g15370
ORF Names:	F26H6.11

Organism

Arabidopsis thaliana (Mouse-ear cress)

Taxonomic identifier

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	533 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Function	May be involved in cell wall biosynthesis. May act as a fucosyltransferase.
Pathway	Protein modification; protein glycosylation.
Subcellular location	Golgi apparatus › Golgi stack membrane; Single-pass type II membrane protein By similarity. Note: Membrane-bound form in trans cisternae of Golgi By similarity.
Tissue specificity	Expressed in roots, leaves, flowers and siliques.
Sequence similarities	Belongs to the glycosyltransferase 37 family.
Sequence caution	The sequence AAL50624.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
Biological process	Cell wall biogenesis/degradation
Cellular component	Golgi apparatus Membrane
Domain	Signal-anchor Transmembrane Transmembrane helix
Molecular function	Glycosyltransferase Transferase
PTM	Glycoprotein
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	cell wall biogenesis Inferred from electronic annotation. Source: InterPro cellular cell wall organization Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	Golgi cisterna membrane Inferred from electronic annotation. Source: UniProtKB-SubCell integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	galactoside 2-alpha-L-fucosyltransferase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Chain

533

Probable fucosyltransferase 5

PRO_0000193914

Regions

Topological domain

13

Cytoplasmic Potential

Transmembrane

21

Helical; Signal-anchor for type II membrane protein; Potential

Topological domain

499

Lumenal Potential

Amino acid modifications

Glycosylation

1

N-linked (GlcNAc...) Potential

Glycosylation

1

N-linked (GlcNAc...) Potential

Glycosylation

1

N-linked (GlcNAc...) Potential

Glycosylation

1

N-linked (GlcNAc...) Potential

Glycosylation

1

N-linked (GlcNAc...) Potential

Sequences

Sequence

Length

Mass (Da)

Tools

Q9SJP4 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 63CE63AFEAD36E43
Show »

533

61,173

        10         20         30         40         50         60 
MYQKFQISGK IVKTLGLKMK VLIAVSFGSL LFILSYSNNF NNKLLDATTK VDIKETEKPV 

        70         80         90        100        110        120 
DKLIGGLLTA DFDEGSCLSR YHKYFLYRKP SPYKPSEYLV SKLRSYEMLH KRCGPDTEYY 

       130        140        150        160        170        180 
KEAIEKLSRD DASESNGECR YIVWVAGYGL GNRLLTLASV FLYALLTERI ILVDNRKDVS 

       190        200        210        220        230        240 
DLLCEPFPGT SWLLPLDFPM LNYTYAWGYN KEYPRCYGTM SEKHSINSTS IPPHLYMHNL 

       250        260        270        280        290        300 
HDSRDSDKLF VCQKDQSLID KVPWLIVQAN VYFVPSLWFN PTFQTELVKL FPQKETVFHH 

       310        320        330        340        350        360 
LARYLFHPTN EVWDMVTDYY HAHLSKADER LGIQIRVFGK PDGRFKHVID QVISCTQREK 

       370        380        390        400        410        420 
LLPEFATPEE SKVNISKTPK LKSVLVASLY PEFSGNLTNM FSKRPSSTGE IVEVYQPSGE 

       430        440        450        460        470        480 
RVQQTDKKSH DQKALAEMYL LSLTDNIVTS ARSTFGYVSY SLGGLKPWLL YQPTNFTTPN 

       490        500        510        520        530 
PPCVRSKSME PCYLTPPSHG CEADWGTNSG KILPFVRHCE DLIYGGLKLY DEF

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Characterization of a family of Arabidopsis genes related to xyloglucan fucosyltransferase1." Sarria R., Wagner T.A., O'Neill M.A., Faik A., Wilkerson C.G., Keegstra K., Raikhel N.V. Plant Physiol. 127:1595-1606(2001) [PubMed: 11743104] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA].
[2]	"Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana." Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D., Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V., Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S., Cronin L.A. Venter J.C. Nature 402:761-768(1999) [PubMed: 10617197] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[3]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Columbia.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AF417475 mRNA. Translation: AAL50624.1. Different initiation. AC006920 Genomic DNA. Translation: AAD22287.1. CP002685 Genomic DNA. Translation: AEC06394.1.
IPI	IPI00524873.
PIR	B84528.
RefSeq	NP_179139.1. NM_127097.1.
UniGene	At.28326.
3D structure databases
ProteinModelPortal	Q9SJP4.
ModBase	Search...
Protein family/group databases
CAZy	GT37. Glycosyltransferase Family 37.
Proteomic databases
PRIDE	Q9SJP4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	AT2G15370.1; AT2G15370.1; AT2G15370.
GeneID	816029.
GenomeReviews	Gene locus AT2G15370 in contig CT485783_GR.
KEGG	ath:AT2G15370.
NMPDR	fig\|3702.1.peg.8542.
Organism-specific databases
TAIR	At2g15370.
Phylogenomic databases
GeneTree	EPGT00050000010289.
HOGENOM	HBG319216.
InParanoid	Q9SJP4.
OMA	NISKTPK.
PhylomeDB	Q9SJP4.
ProtClustDB	CLSN2913144.
Gene expression databases
ArrayExpress	Q9SJP4.
Genevestigator	Q9SJP4.
GermOnline	AT2G15370. Arabidopsis thaliana.
Family and domain databases
InterPro	IPR004938. XG_FTase. [Graphical view]
KO	K13681.
Pfam	PF03254. XG_FTase. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

FUT5_ARATH

Accession

Primary (citable) accession number: Q9SJP4

Entry history

Integrated into UniProtKB/Swiss-Prot:	March 5, 2002
Last sequence update:	May 1, 2000
Last modified:	December 14, 2011
This is version 69 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Plant Protein Annotation Program

Relevant documents

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

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Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents