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Protein

Zinc finger A20 and AN1 domain-containing stress-associated protein 4

Gene

SAP4

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

May be involved in environmental stress response.By similarity

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri10 – 4435A20-typePROSITE-ProRule annotationAdd
BLAST
Zinc fingeri99 – 14244AN1-typePROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Zinc finger A20 and AN1 domain-containing stress-associated protein 4
Short name:
AtSAP4
Gene namesi
Name:SAP4
Ordered Locus Names:At2g36320
ORF Names:F2H17.7
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

TAIRiAT2G36320.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 161161Zinc finger A20 and AN1 domain-containing stress-associated protein 4PRO_0000066578Add
BLAST

Proteomic databases

PaxDbiQ9SJM6.
PRIDEiQ9SJM6.

Expressioni

Gene expression databases

GenevisibleiQ9SJM6. AT.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT2G36320.1.

Structurei

Secondary structure

1
161
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Turni103 – 1053Combined sources
Beta strandi117 – 1193Combined sources
Turni124 – 1263Combined sources
Turni129 – 1335Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1WFHNMR-A92-142[»]
ProteinModelPortaliQ9SJM6.
SMRiQ9SJM6. Positions 98-142.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9SJM6.

Family & Domainsi

Sequence similaritiesi

Contains 1 A20-type zinc finger.PROSITE-ProRule annotation
Contains 1 AN1-type zinc finger.PROSITE-ProRule annotation

Zinc finger

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri10 – 4435A20-typePROSITE-ProRule annotationAdd
BLAST
Zinc fingeri99 – 14244AN1-typePROSITE-ProRule annotationAdd
BLAST

Keywords - Domaini

Zinc-finger

Phylogenomic databases

eggNOGiKOG3173. Eukaryota.
ENOG4111UWC. LUCA.
HOGENOMiHOG000238229.
InParanoidiQ9SJM6.
OMAiKERQQHQ.
PhylomeDBiQ9SJM6.

Family and domain databases

Gene3Di4.10.1110.10. 1 hit.
InterProiIPR002653. Znf_A20.
IPR000058. Znf_AN1.
[Graphical view]
PfamiPF01754. zf-A20. 1 hit.
PF01428. zf-AN1. 1 hit.
[Graphical view]
SMARTiSM00259. ZnF_A20. 1 hit.
SM00154. ZnF_AN1. 1 hit.
[Graphical view]
PROSITEiPS51036. ZF_A20. 1 hit.
PS51039. ZF_AN1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9SJM6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEEHRCETP EGHRLCVNNC GFFGSSATMN LCSNCYGDLC LKQQQQASMK
60 70 80 90 100
STVESSLSPV IAPVLENYAA ELEIPTTKKT EEKKPIQIPT EQPSPPQRPN
110 120 130 140 150
RCTVCRKRVG LTGFMCRCGT TFCGSHRYPE VHGCTFDFKS AGREEIAKAN
160
PLVIAAKLQK I
Length:161
Mass (Da):17,784
Last modified:May 1, 2000 - v1
Checksum:iBDF9CB123894DD95
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC006921 Genomic DNA. Translation: AAD21434.1.
CP002685 Genomic DNA. Translation: AEC09232.1.
BT028881 mRNA. Translation: ABI49428.1.
AY086347 mRNA. Translation: AAM64415.1.
PIRiC84779.
RefSeqiNP_565844.1. NM_129189.4.
UniGeneiAt.14117.
At.73144.

Genome annotation databases

EnsemblPlantsiAT2G36320.1; AT2G36320.1; AT2G36320.
GeneIDi818205.
GrameneiAT2G36320.1; AT2G36320.1; AT2G36320.
KEGGiath:AT2G36320.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC006921 Genomic DNA. Translation: AAD21434.1.
CP002685 Genomic DNA. Translation: AEC09232.1.
BT028881 mRNA. Translation: ABI49428.1.
AY086347 mRNA. Translation: AAM64415.1.
PIRiC84779.
RefSeqiNP_565844.1. NM_129189.4.
UniGeneiAt.14117.
At.73144.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1WFHNMR-A92-142[»]
ProteinModelPortaliQ9SJM6.
SMRiQ9SJM6. Positions 98-142.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT2G36320.1.

Proteomic databases

PaxDbiQ9SJM6.
PRIDEiQ9SJM6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT2G36320.1; AT2G36320.1; AT2G36320.
GeneIDi818205.
GrameneiAT2G36320.1; AT2G36320.1; AT2G36320.
KEGGiath:AT2G36320.

Organism-specific databases

TAIRiAT2G36320.

Phylogenomic databases

eggNOGiKOG3173. Eukaryota.
ENOG4111UWC. LUCA.
HOGENOMiHOG000238229.
InParanoidiQ9SJM6.
OMAiKERQQHQ.
PhylomeDBiQ9SJM6.

Miscellaneous databases

EvolutionaryTraceiQ9SJM6.
PROiQ9SJM6.

Gene expression databases

GenevisibleiQ9SJM6. AT.

Family and domain databases

Gene3Di4.10.1110.10. 1 hit.
InterProiIPR002653. Znf_A20.
IPR000058. Znf_AN1.
[Graphical view]
PfamiPF01754. zf-A20. 1 hit.
PF01428. zf-AN1. 1 hit.
[Graphical view]
SMARTiSM00259. ZnF_A20. 1 hit.
SM00154. ZnF_AN1. 1 hit.
[Graphical view]
PROSITEiPS51036. ZF_A20. 1 hit.
PS51039. ZF_AN1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "Arabidopsis ORF clones."
    Bautista V.R., Kim C.J., Chen H., Quinitio C., Ecker J.R.
    Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.
  4. "Full-length cDNA from Arabidopsis thaliana."
    Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B., Feldmann K.A.
    Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
  5. "Genome-wide analysis of the stress associated protein (SAP) gene family containing A20/AN1 zinc-finger(s) in rice and their phylogenetic relationship with Arabidopsis."
    Vij S., Tyagi A.K.
    Mol. Genet. Genomics 276:565-575(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY.
  6. "Solution structure of the ZF-AN1 domain from Arabidopsis thaliana At2g36320 protein."
    RIKEN structural genomics initiative (RSGI)
    Submitted (NOV-2004) to the PDB data bank
    Cited for: STRUCTURE BY NMR OF 92-142.

Entry informationi

Entry nameiSAP4_ARATH
AccessioniPrimary (citable) accession number: Q9SJM6
Secondary accession number(s): Q0IGN9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 30, 2005
Last sequence update: May 1, 2000
Last modified: May 11, 2016
This is version 103 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.