Reviewed,
UniProtKB/Swiss-Prot Q9SJM0 (CALSA_ARATH)
Last modified
June 16, 2009.
Version 41.
History...
Clusters with 100%,
90%,
50% identity |
Documents (2) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Callose synthase 10 EC=2.4.1.34 Alternative name(s): 1,3-beta-glucan synthase Protein GLUCAN SYNTHASE-LIKE 8 | ||||||||
| Gene names |
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| Organism | Arabidopsis thaliana (Mouse-ear cress) [Complete proteome] | ||||||||
| Taxonomic identifier | 3702 [NCBI] | ||||||||
| Taxonomic lineage | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Arabidopsis |
Protein attributes
| Sequence length | 1675 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at transcript level. |
General annotation (Comments)
| Function | Involved in sporophytic and gametophytic development. Required for normal plant development. During pollen formation, required for the entry of microspores into mitosis. During plant growth and development, callose is found as a transitory component of the cell plate in dividing cells, is a major component of pollen mother cell walls and pollen tubes, and is found as a structural component of plasmodesmatal canals. Ref.5 |
| Catalytic activity | UDP-glucose + ((1->3)-beta-D-glucosyl)(n) = UDP + ((1->3)-beta-D-glucosyl)(n+1). |
| Subcellular location | Cell membrane; Multi-pass membrane protein Probable. |
| Developmental stage | Expressed throughout pollen development with a at mature pollen stage. Ref.5 |
| Disruption phenotype | Plants develop collapsed and inviable pollen grains. Ref.5 |
| Sequence similarities | Belongs to the glycosyltransferase 48 family. Contains 3 HAT repeats. Contains 3 LRR (leucine-rich) repeats. |
| Sequence caution | The sequence AAD31571.1 differs from that shown. Reason: Erroneous gene model prediction. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Cell shape Cell wall biogenesis/degradation |
| Cellular component | Cell membrane Membrane |
| Domain | Leucine-rich repeat Repeat Transmembrane |
| Molecular function | Glycosyltransferase Transferase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | 1,3-beta-glucan biosynthetic process Inferred from electronic annotation. Source: InterPro cell wall organizationInferred from electronic annotation. Source: UniProtKB-KW regulation of cell shapeInferred from electronic annotation. Source: UniProtKB-KW |
| Cellular component | 1,3-beta-glucan synthase complex Inferred from electronic annotation. Source: InterPro integral to membraneInferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | 1,3-beta-glucan synthase activity Inferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 1675 | 1675 | Callose synthase 10 | PRO_0000334582 | |||||
Regions | |||||||||
| Transmembrane | 425 – 445 | 21 | Potential | ||||||
| Transmembrane | 458 – 478 | 21 | Potential | ||||||
| Transmembrane | 498 – 518 | 21 | Potential | ||||||
| Transmembrane | 1265 – 1285 | 21 | Potential | ||||||
| Transmembrane | 1320 – 1340 | 21 | Potential | ||||||
| Transmembrane | 1345 – 1365 | 21 | Potential | ||||||
| Transmembrane | 1412 – 1432 | 21 | Potential | ||||||
| Transmembrane | 1435 – 1455 | 21 | Potential | ||||||
| Transmembrane | 1509 – 1529 | 21 | Potential | ||||||
| Transmembrane | 1549 – 1569 | 21 | Potential | ||||||
| Transmembrane | 1582 – 1602 | 21 | Potential | ||||||
| Transmembrane | 1624 – 1644 | 21 | Potential | ||||||
| Repeat | 24 – 56 | 33 | HAT 1 | ||||||
| Repeat | 527 – 550 | 24 | LRR 1 | ||||||
| Repeat | 737 – 760 | 24 | LRR 2 | ||||||
| Repeat | 886 – 919 | 34 | HAT 2 | ||||||
| Repeat | 971 – 993 | 23 | LRR 3 | ||||||
| Repeat | 1450 – 1482 | 33 | HAT 3 | ||||||
Experimental info | |||||||||
| Sequence conflict | 1601 – 1602 | 2 | TW → YG in BAF01442. Ref.2 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana." Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D., Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V., Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S., Cronin L.A. Venter J.C.Nature 402:761-768(1999) [PubMed: 10617197] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia. |
| [2] | "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs." Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K. Shinozaki K.Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1601-1675. Strain: cv. Columbia. |
| [3] | "A cell plate-specific callose synthase and its interaction with phragmoplastin." Hong Z., Delauney A.J., Verma D.P.S. Plant Cell 13:755-768(2001) [PubMed: 11283334] [Abstract] Cited for: GENE FAMILY AND NOMENCLATURE. |
| [4] | "Two callose synthases, GSL1 and GSL5, play an essential and redundant role in plant and pollen development and in fertility." Enns L.C., Kanaoka M.M., Torii K.U., Comai L., Okada K., Cleland R.E. Plant Mol. Biol. 58:333-349(2005) [PubMed: 16021399] [Abstract] Cited for: NOMENCLATURE. |
| [5] | "Dual function of Arabidopsis glucan synthase-like genes GSL8 and GSL10 in male gametophyte development and plant growth." Toeller A., Brownfield L., Neu C., Twell D., Schulze-Lefert P. Plant J. 54:911-923(2008) [PubMed: 18315544] [Abstract] Cited for: FUNCTION, DEVELOPMENTAL STAGE, DISRUPTION PHENOTYPE. |
Cross-references
Sequence databases | |
|---|---|
| AC006922 Genomic DNA. Translation: AAD31571.1. Sequence problems. AK229594 mRNA. Translation: BAF01442.1. | |
| IPI | IPI00532489. |
| PIR | E84785. |
3D structure databases | |
| ModBase | Search... |
Protein family/group databases | |
| CAZy | GT48. Glycosyltransferase Family 48. |
Proteomic databases | |
| PRIDE | Q9SJM0. |
Genome annotation databases | |
| GenomeReviews | Gene locus AT2G36850 in contig CT485783_GR. |
Organism-specific databases | |
| TAIR | At2g36850. |
Gene expression databases | |
| ArrayExpress | Q9SJM0. |
Family and domain databases | |
| InterPro | IPR001810. F-box. IPR003440. Glyco_trans_48. [Graphical view] |
| Pfam | PF00646. F-box. 1 hit. PF02364. Glucan_synthase. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | CALSA_ARATH | ||||||||
| Accession | Primary (citable) accession number: Q9SJM0 Secondary accession number(s): Q0WN58 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | PPAP (Plant Proteome Annotation Project) | ||||||||
Relevant documents
| Arabidopsis thaliana Arabidopsis thaliana: entries and gene names |
| SIMILARITY comments Index of protein domains and families |

Clusters with


