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Q9SJL6

- MEM11_ARATH

UniProt

Q9SJL6 - MEM11_ARATH

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Protein

Membrin-11

Gene

MEMB11

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 4 out of 5- Experimental evidence at protein leveli

Functioni

Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.By similarity

GO - Biological processi

  1. protein transport Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Protein transport, Transport

Enzyme and pathway databases

ReactomeiREACT_187630. XBP1(S) activates chaperone genes.

Names & Taxonomyi

Protein namesi
Recommended name:
Membrin-11
Short name:
AtMEMB11
Alternative name(s):
27 kDa Golgi SNARE protein
Golgi SNAP receptor complex member 2-1
Gene namesi
Name:MEMB11
Ordered Locus Names:At2g36900
ORF Names:T1J8.8
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 2

Organism-specific databases

TAIRiAT2G36900.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini2 – 200199CytoplasmicSequence AnalysisAdd
BLAST
Transmembranei201 – 22121Helical; Anchor for type IV membrane proteinSequence AnalysisAdd
BLAST
Topological domaini222 – 2254VesicularSequence Analysis

GO - Cellular componenti

  1. Golgi stack Source: InterPro
  2. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Golgi apparatus, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11Removed1 Publication
Chaini2 – 225224Membrin-11PRO_0000212554Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei2 – 21N-acetylalanine1 Publication
Cross-linki113 – 113Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)1 Publication

Keywords - PTMi

Acetylation, Isopeptide bond, Ubl conjugation

Proteomic databases

PaxDbiQ9SJL6.
PRIDEiQ9SJL6.

Expressioni

Gene expression databases

ExpressionAtlasiQ9SJL6. baseline and differential.
GenevestigatoriQ9SJL6.

Interactioni

Protein-protein interaction databases

BioGridi3608. 2 interactions.
IntActiQ9SJL6. 2 interactions.
STRINGi3702.AT2G36900.1-P.

Structurei

3D structure databases

ProteinModelPortaliQ9SJL6.
SMRiQ9SJL6. Positions 137-193.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the GOSR2 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG148687.
HOGENOMiHOG000264938.
InParanoidiQ9SJL6.
KOiK08496.
PhylomeDBiQ9SJL6.

Family and domain databases

InterProiIPR027027. GOSR2/Membrin/Bos1.
[Graphical view]
PIRSFiPIRSF028865. Membrin-2. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 1 isoform i produced by alternative splicing. Align

Note: A number of isoforms are produced. According to EST sequences.

Isoform 1 (identifier: Q9SJL6-1) [UniParc]FASTAAdd to Basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MASGIVEGGG SLSDVYSSAK RILLKARDGI ERLERFESSS MDSPDLASSV
60 70 80 90 100
KRDITEVRSL CSNMDTLWRS IPVKSQRDLW RRKTEQVGEE AEYLNLSLEK
110 120 130 140 150
YMSRNQRKML EAKERADLLG RASGEGAHIL QIFDEEAQAM SSVKNSKRML
160 170 180 190 200
EESFSSGVAI LSKYAEQRDR LKSAQRKALD VLNTVGLSNS VLRLIERRNR
210 220
VDTWIKYAGM IATLVILYLF IRWTR
Length:225
Mass (Da):25,628
Last modified:May 1, 2000 - v1
Checksum:iBF92037DD3D63A22
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC006922 Genomic DNA. Translation: AAD31575.1.
CP002685 Genomic DNA. Translation: AEC09318.1.
AY063816 mRNA. Translation: AAL36172.1.
AY091350 mRNA. Translation: AAM14289.1.
AY086341 mRNA. Translation: AAM64409.1.
PIRiA84786.
RefSeqiNP_181227.1. NM_129246.2. [Q9SJL6-1]
UniGeneiAt.27189.

Genome annotation databases

EnsemblPlantsiAT2G36900.1; AT2G36900.1; AT2G36900. [Q9SJL6-1]
GeneIDi818264.
KEGGiath:AT2G36900.

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC006922 Genomic DNA. Translation: AAD31575.1 .
CP002685 Genomic DNA. Translation: AEC09318.1 .
AY063816 mRNA. Translation: AAL36172.1 .
AY091350 mRNA. Translation: AAM14289.1 .
AY086341 mRNA. Translation: AAM64409.1 .
PIRi A84786.
RefSeqi NP_181227.1. NM_129246.2. [Q9SJL6-1 ]
UniGenei At.27189.

3D structure databases

ProteinModelPortali Q9SJL6.
SMRi Q9SJL6. Positions 137-193.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 3608. 2 interactions.
IntActi Q9SJL6. 2 interactions.
STRINGi 3702.AT2G36900.1-P.

Proteomic databases

PaxDbi Q9SJL6.
PRIDEi Q9SJL6.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT2G36900.1 ; AT2G36900.1 ; AT2G36900 . [Q9SJL6-1 ]
GeneIDi 818264.
KEGGi ath:AT2G36900.

Organism-specific databases

GeneFarmi 4297. 433.
TAIRi AT2G36900.

Phylogenomic databases

eggNOGi NOG148687.
HOGENOMi HOG000264938.
InParanoidi Q9SJL6.
KOi K08496.
PhylomeDBi Q9SJL6.

Enzyme and pathway databases

Reactomei REACT_187630. XBP1(S) activates chaperone genes.

Miscellaneous databases

PROi Q9SJL6.

Gene expression databases

ExpressionAtlasi Q9SJL6. baseline and differential.
Genevestigatori Q9SJL6.

Family and domain databases

InterProi IPR027027. GOSR2/Membrin/Bos1.
[Graphical view ]
PIRSFi PIRSF028865. Membrin-2. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
    Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
    , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
    Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.
  4. "Full-length cDNA from Arabidopsis thaliana."
    Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B., Feldmann K.A.
    Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
  5. "Multidimensional protein identification technology (MudPIT) analysis of ubiquitinated proteins in plants."
    Maor R., Jones A., Nuehse T.S., Studholme D.J., Peck S.C., Shirasu K.
    Mol. Cell. Proteomics 6:601-610(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: UBIQUITINATION [LARGE SCALE ANALYSIS] AT LYS-113.
    Strain: cv. Landsberg erecta.
  6. "Comparative large-scale characterisation of plant vs. mammal proteins reveals similar and idiosyncratic N-alpha acetylation features."
    Bienvenut W.V., Sumpton D., Martinez A., Lilla S., Espagne C., Meinnel T., Giglione C.
    Mol. Cell. Proteomics 11:M111.015131-M111.015131(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT ALA-2, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS], CLEAVAGE OF INITIATOR METHIONINE [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiMEM11_ARATH
AccessioniPrimary (citable) accession number: Q9SJL6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: May 1, 2000
Last modified: October 29, 2014
This is version 107 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3