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Protein

Membrin-11

Gene

MEMB11

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processProtein transport, Transport

Enzyme and pathway databases

ReactomeiR-ATH-204005. COPII (Coat Protein 2) Mediated Vesicle Transport.
R-ATH-5694530. Cargo concentration in the ER.
R-ATH-6807878. COPI-mediated anterograde transport.
R-ATH-6811438. Intra-Golgi traffic.

Names & Taxonomyi

Protein namesi
Recommended name:
Membrin-11
Short name:
AtMEMB11
Alternative name(s):
27 kDa Golgi SNARE protein
Golgi SNAP receptor complex member 2-1
Gene namesi
Name:MEMB11
Ordered Locus Names:At2g36900
ORF Names:T1J8.8
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

AraportiAT2G36900.
TAIRilocus:2057946. AT2G36900.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini2 – 200CytoplasmicSequence analysisAdd BLAST199
Transmembranei201 – 221Helical; Anchor for type IV membrane proteinSequence analysisAdd BLAST21
Topological domaini222 – 225VesicularSequence analysis4

GO - Cellular componenti

Keywords - Cellular componenti

Golgi apparatus, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedCombined sources
ChainiPRO_00002125542 – 225Membrin-11Add BLAST224

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei2N-acetylalanineCombined sources1

Keywords - PTMi

Acetylation

Proteomic databases

PaxDbiQ9SJL6.

Expressioni

Gene expression databases

ExpressionAtlasiQ9SJL6. baseline and differential.
GenevisibleiQ9SJL6. AT.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

BioGridi3608. 2 interactors.
IntActiQ9SJL6. 2 interactors.
STRINGi3702.AT2G36900.1.

Structurei

3D structure databases

ProteinModelPortaliQ9SJL6.
SMRiQ9SJL6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the GOSR2 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG3251. Eukaryota.
ENOG4111M37. LUCA.
HOGENOMiHOG000264938.
InParanoidiQ9SJL6.
KOiK08496.
PhylomeDBiQ9SJL6.

Family and domain databases

InterProiView protein in InterPro
IPR027027. GOSR2/Membrin/Bos1.
PIRSFiPIRSF028865. Membrin-2. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 1 isoform i produced by alternative splicing. AlignAdd to basket

Note: A number of isoforms are produced. According to EST sequences.
Isoform 1 (identifier: Q9SJL6-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MASGIVEGGG SLSDVYSSAK RILLKARDGI ERLERFESSS MDSPDLASSV
60 70 80 90 100
KRDITEVRSL CSNMDTLWRS IPVKSQRDLW RRKTEQVGEE AEYLNLSLEK
110 120 130 140 150
YMSRNQRKML EAKERADLLG RASGEGAHIL QIFDEEAQAM SSVKNSKRML
160 170 180 190 200
EESFSSGVAI LSKYAEQRDR LKSAQRKALD VLNTVGLSNS VLRLIERRNR
210 220
VDTWIKYAGM IATLVILYLF IRWTR
Length:225
Mass (Da):25,628
Last modified:May 1, 2000 - v1
Checksum:iBF92037DD3D63A22
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC006922 Genomic DNA. Translation: AAD31575.1.
CP002685 Genomic DNA. Translation: AEC09318.1.
AY063816 mRNA. Translation: AAL36172.1.
AY091350 mRNA. Translation: AAM14289.1.
AY086341 mRNA. Translation: AAM64409.1.
PIRiA84786.
RefSeqiNP_181227.1. NM_129246.3. [Q9SJL6-1]
UniGeneiAt.27189.

Genome annotation databases

EnsemblPlantsiAT2G36900.1; AT2G36900.1; AT2G36900. [Q9SJL6-1]
GeneIDi818264.
GrameneiAT2G36900.1; AT2G36900.1; AT2G36900.
KEGGiath:AT2G36900.

Keywords - Coding sequence diversityi

Alternative splicing

Similar proteinsi

Entry informationi

Entry nameiMEM11_ARATH
AccessioniPrimary (citable) accession number: Q9SJL6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: May 1, 2000
Last modified: August 30, 2017
This is version 127 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families