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Q9SJL6

- MEM11_ARATH

UniProt

Q9SJL6 - MEM11_ARATH

Protein

Membrin-11

Gene

MEMB11

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 4 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 106 (01 Oct 2014)
      Sequence version 1 (01 May 2000)
      Previous versions | rss
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    Functioni

    Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.By similarity

    GO - Biological processi

    1. protein transport Source: UniProtKB-KW

    Keywords - Biological processi

    Protein transport, Transport

    Enzyme and pathway databases

    ReactomeiREACT_187630. XBP1(S) activates chaperone genes.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Membrin-11
    Short name:
    AtMEMB11
    Alternative name(s):
    27 kDa Golgi SNARE protein
    Golgi SNAP receptor complex member 2-1
    Gene namesi
    Name:MEMB11
    Ordered Locus Names:At2g36900
    ORF Names:T1J8.8
    OrganismiArabidopsis thaliana (Mouse-ear cress)
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000006548: Chromosome 2

    Organism-specific databases

    TAIRiAT2G36900.

    Subcellular locationi

    GO - Cellular componenti

    1. Golgi membrane Source: UniProtKB-SubCell
    2. Golgi stack Source: InterPro
    3. integral component of membrane Source: UniProtKB-KW

    Keywords - Cellular componenti

    Golgi apparatus, Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Initiator methioninei1 – 11Removed1 Publication
    Chaini2 – 225224Membrin-11PRO_0000212554Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei2 – 21N-acetylalanine1 Publication
    Cross-linki113 – 113Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)1 Publication

    Keywords - PTMi

    Acetylation, Isopeptide bond, Ubl conjugation

    Proteomic databases

    PaxDbiQ9SJL6.
    PRIDEiQ9SJL6.

    Expressioni

    Gene expression databases

    ArrayExpressiQ9SJL6.
    GenevestigatoriQ9SJL6.

    Interactioni

    Protein-protein interaction databases

    BioGridi3608. 2 interactions.
    IntActiQ9SJL6. 2 interactions.
    STRINGi3702.AT2G36900.1-P.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9SJL6.
    SMRiQ9SJL6. Positions 137-193.
    ModBaseiSearch...
    MobiDBiSearch...

    Topological domain

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Topological domaini2 – 200199CytoplasmicSequence AnalysisAdd
    BLAST
    Topological domaini222 – 2254VesicularSequence Analysis

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei201 – 22121Helical; Anchor for type IV membrane proteinSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the GOSR2 family.Curated

    Keywords - Domaini

    Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiNOG148687.
    HOGENOMiHOG000264938.
    InParanoidiQ9SJL6.
    KOiK08496.
    PhylomeDBiQ9SJL6.

    Family and domain databases

    InterProiIPR027027. GOSR2/Membrin/Bos1.
    [Graphical view]
    PIRSFiPIRSF028865. Membrin-2. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    This entry describes 1 isoform i produced by alternative splicing. Align

    Note: A number of isoforms are produced. According to EST sequences.

    Isoform 1 (identifier: Q9SJL6-1) [UniParc]FASTAAdd to Basket

    This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

    « Hide

    MASGIVEGGG SLSDVYSSAK RILLKARDGI ERLERFESSS MDSPDLASSV    50
    KRDITEVRSL CSNMDTLWRS IPVKSQRDLW RRKTEQVGEE AEYLNLSLEK 100
    YMSRNQRKML EAKERADLLG RASGEGAHIL QIFDEEAQAM SSVKNSKRML 150
    EESFSSGVAI LSKYAEQRDR LKSAQRKALD VLNTVGLSNS VLRLIERRNR 200
    VDTWIKYAGM IATLVILYLF IRWTR 225
    Length:225
    Mass (Da):25,628
    Last modified:May 1, 2000 - v1
    Checksum:iBF92037DD3D63A22
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC006922 Genomic DNA. Translation: AAD31575.1.
    CP002685 Genomic DNA. Translation: AEC09318.1.
    AY063816 mRNA. Translation: AAL36172.1.
    AY091350 mRNA. Translation: AAM14289.1.
    AY086341 mRNA. Translation: AAM64409.1.
    PIRiA84786.
    RefSeqiNP_181227.1. NM_129246.2. [Q9SJL6-1]
    UniGeneiAt.27189.

    Genome annotation databases

    EnsemblPlantsiAT2G36900.1; AT2G36900.1; AT2G36900. [Q9SJL6-1]
    GeneIDi818264.
    KEGGiath:AT2G36900.

    Keywords - Coding sequence diversityi

    Alternative splicing

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC006922 Genomic DNA. Translation: AAD31575.1 .
    CP002685 Genomic DNA. Translation: AEC09318.1 .
    AY063816 mRNA. Translation: AAL36172.1 .
    AY091350 mRNA. Translation: AAM14289.1 .
    AY086341 mRNA. Translation: AAM64409.1 .
    PIRi A84786.
    RefSeqi NP_181227.1. NM_129246.2. [Q9SJL6-1 ]
    UniGenei At.27189.

    3D structure databases

    ProteinModelPortali Q9SJL6.
    SMRi Q9SJL6. Positions 137-193.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 3608. 2 interactions.
    IntActi Q9SJL6. 2 interactions.
    STRINGi 3702.AT2G36900.1-P.

    Proteomic databases

    PaxDbi Q9SJL6.
    PRIDEi Q9SJL6.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi AT2G36900.1 ; AT2G36900.1 ; AT2G36900 . [Q9SJL6-1 ]
    GeneIDi 818264.
    KEGGi ath:AT2G36900.

    Organism-specific databases

    GeneFarmi 4297. 433.
    TAIRi AT2G36900.

    Phylogenomic databases

    eggNOGi NOG148687.
    HOGENOMi HOG000264938.
    InParanoidi Q9SJL6.
    KOi K08496.
    PhylomeDBi Q9SJL6.

    Enzyme and pathway databases

    Reactomei REACT_187630. XBP1(S) activates chaperone genes.

    Miscellaneous databases

    PROi Q9SJL6.

    Gene expression databases

    ArrayExpressi Q9SJL6.
    Genevestigatori Q9SJL6.

    Family and domain databases

    InterProi IPR027027. GOSR2/Membrin/Bos1.
    [Graphical view ]
    PIRSFi PIRSF028865. Membrin-2. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Columbia.
    2. The Arabidopsis Information Resource (TAIR)
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: GENOME REANNOTATION.
      Strain: cv. Columbia.
    3. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
      Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
      , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
      Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Columbia.
    4. "Full-length cDNA from Arabidopsis thaliana."
      Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B., Feldmann K.A.
      Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    5. "Multidimensional protein identification technology (MudPIT) analysis of ubiquitinated proteins in plants."
      Maor R., Jones A., Nuehse T.S., Studholme D.J., Peck S.C., Shirasu K.
      Mol. Cell. Proteomics 6:601-610(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: UBIQUITINATION [LARGE SCALE ANALYSIS] AT LYS-113.
      Strain: cv. Landsberg erecta.
    6. "Comparative large-scale characterisation of plant vs. mammal proteins reveals similar and idiosyncratic N-alpha acetylation features."
      Bienvenut W.V., Sumpton D., Martinez A., Lilla S., Espagne C., Meinnel T., Giglione C.
      Mol. Cell. Proteomics 11:M111.015131-M111.015131(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT ALA-2, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS], CLEAVAGE OF INITIATOR METHIONINE [LARGE SCALE ANALYSIS].

    Entry informationi

    Entry nameiMEM11_ARATH
    AccessioniPrimary (citable) accession number: Q9SJL6
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 1, 2000
    Last sequence update: May 1, 2000
    Last modified: October 1, 2014
    This is version 106 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Arabidopsis thaliana
      Arabidopsis thaliana: entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3