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Q9SJL6 (MEM11_ARATH) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 104. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Membrin-11

Short name=AtMEMB11
Alternative name(s):
27 kDa Golgi SNARE protein
Golgi SNAP receptor complex member 2-1
Gene names
Name:MEMB11
Ordered Locus Names:At2g36900
ORF Names:T1J8.8
OrganismArabidopsis thaliana (Mouse-ear cress) [Reference proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length225 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network By similarity.

Subcellular location

Golgi apparatus membrane; Single-pass type IV membrane protein Potential.

Sequence similarities

Belongs to the GOSR2 family.

Ontologies

Keywords
   Biological processProtein transport
Transport
   Cellular componentGolgi apparatus
Membrane
   Coding sequence diversityAlternative splicing
   DomainTransmembrane
Transmembrane helix
   PTMAcetylation
Isopeptide bond
Ubl conjugation
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processprotein transport

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular_componentGolgi membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

Golgi stack

Inferred from electronic annotation. Source: InterPro

integral component of membrane

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Alternative products

This entry describes 1 isoform produced by alternative splicing. [Select]

Note: A number of isoforms are produced. According to EST sequences.
Isoform 1 (identifier: Q9SJL6-1)

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Initiator methionine11Removed Ref.6
Chain2 – 225224Membrin-11
PRO_0000212554

Regions

Topological domain2 – 200199Cytoplasmic Potential
Transmembrane201 – 22121Helical; Anchor for type IV membrane protein; Potential
Topological domain222 – 2254Vesicular Potential

Amino acid modifications

Modified residue21N-acetylalanine Ref.6
Cross-link113Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) Ref.5

Sequences

Sequence LengthMass (Da)Tools
Isoform 1 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: BF92037DD3D63A22

FASTA22525,628
        10         20         30         40         50         60 
MASGIVEGGG SLSDVYSSAK RILLKARDGI ERLERFESSS MDSPDLASSV KRDITEVRSL 

        70         80         90        100        110        120 
CSNMDTLWRS IPVKSQRDLW RRKTEQVGEE AEYLNLSLEK YMSRNQRKML EAKERADLLG 

       130        140        150        160        170        180 
RASGEGAHIL QIFDEEAQAM SSVKNSKRML EESFSSGVAI LSKYAEQRDR LKSAQRKALD 

       190        200        210        220 
VLNTVGLSNS VLRLIERRNR VDTWIKYAGM IATLVILYLF IRWTR 

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana."
Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D., Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V., Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S., Cronin L.A. expand/collapse author list , Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J., Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M., Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O., Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.
Nature 402:761-768(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Columbia.
[3]"Empirical analysis of transcriptional activity in the Arabidopsis genome."
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. expand/collapse author list , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Columbia.
[4]"Full-length cDNA from Arabidopsis thaliana."
Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B., Feldmann K.A.
Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
[5]"Multidimensional protein identification technology (MudPIT) analysis of ubiquitinated proteins in plants."
Maor R., Jones A., Nuehse T.S., Studholme D.J., Peck S.C., Shirasu K.
Mol. Cell. Proteomics 6:601-610(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: UBIQUITINATION [LARGE SCALE ANALYSIS] AT LYS-113.
Strain: cv. Landsberg erecta.
[6]"Comparative large-scale characterisation of plant vs. mammal proteins reveals similar and idiosyncratic N-alpha acetylation features."
Bienvenut W.V., Sumpton D., Martinez A., Lilla S., Espagne C., Meinnel T., Giglione C.
Mol. Cell. Proteomics 11:M111.015131-M111.015131(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT ALA-2, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS], CLEAVAGE OF INITIATOR METHIONINE [LARGE SCALE ANALYSIS].
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC006922 Genomic DNA. Translation: AAD31575.1.
CP002685 Genomic DNA. Translation: AEC09318.1.
AY063816 mRNA. Translation: AAL36172.1.
AY091350 mRNA. Translation: AAM14289.1.
AY086341 mRNA. Translation: AAM64409.1.
PIRA84786.
RefSeqNP_181227.1. NM_129246.2. [Q9SJL6-1]
UniGeneAt.27189.

3D structure databases

ProteinModelPortalQ9SJL6.
SMRQ9SJL6. Positions 137-193.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

BioGrid3608. 2 interactions.
IntActQ9SJL6. 2 interactions.
STRING3702.AT2G36900.1-P.

Proteomic databases

PaxDbQ9SJL6.
PRIDEQ9SJL6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT2G36900.1; AT2G36900.1; AT2G36900. [Q9SJL6-1]
GeneID818264.
KEGGath:AT2G36900.

Organism-specific databases

GeneFarm4297. 433.
TAIRAT2G36900.

Phylogenomic databases

eggNOGNOG148687.
HOGENOMHOG000264938.
InParanoidQ9SJL6.
KOK08496.
PhylomeDBQ9SJL6.

Gene expression databases

ArrayExpressQ9SJL6.
GenevestigatorQ9SJL6.

Family and domain databases

InterProIPR027027. GOSR2/Membrin/Bos1.
[Graphical view]
PIRSFPIRSF028865. Membrin-2. 1 hit.
ProtoNetSearch...

Other

PROQ9SJL6.

Entry information

Entry nameMEM11_ARATH
AccessionPrimary (citable) accession number: Q9SJL6
Entry history
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: May 1, 2000
Last modified: May 14, 2014
This is version 104 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names