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Protein

Cyclin-dependent kinases regulatory subunit 2

Gene

CKS2

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.By similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Cell cycle, Cell division

Enzyme and pathway databases

ReactomeiREACT_283684. Cyclin D associated events in G1.

Names & Taxonomyi

Protein namesi
Recommended name:
Cyclin-dependent kinases regulatory subunit 2
Gene namesi
Name:CKS2
Ordered Locus Names:At2g27970
ORF Names:T1E2.11
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548 Componenti: Chromosome 2

Organism-specific databases

TAIRiAT2G27970.

Subcellular locationi

GO - Cellular componenti

  • cytoplasm Source: TAIR
  • nucleus Source: TAIR
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 8383Cyclin-dependent kinases regulatory subunit 2PRO_0000294095Add
BLAST

Proteomic databases

PaxDbiQ9SJJ5.
PRIDEiQ9SJJ5.

Interactioni

Protein-protein interaction databases

BioGridi2691. 50 interactions.
IntActiQ9SJJ5. 35 interactions.
STRINGi3702.AT2G27970.1.

Structurei

3D structure databases

ProteinModelPortaliQ9SJJ5.
SMRiQ9SJJ5. Positions 3-71.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the CKS family.Curated

Phylogenomic databases

eggNOGiNOG272189.
HOGENOMiHOG000157009.
InParanoidiQ9SJJ5.
KOiK02219.
OMAiIPKNRLM.
PhylomeDBiQ9SJJ5.

Family and domain databases

Gene3Di3.30.170.10. 1 hit.
InterProiIPR000789. Cyclin-dep_kinase_reg-sub.
[Graphical view]
PfamiPF01111. CKS. 1 hit.
[Graphical view]
PRINTSiPR00296. CYCLINKINASE.
SMARTiSM01084. CKS. 1 hit.
[Graphical view]
SUPFAMiSSF55637. SSF55637. 1 hit.
PROSITEiPS00944. CKS_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9SJJ5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGQIQYSDKY FDDTFEYRHV VLPPEVAKLL PKNRILSESE WRAIGVQQSR
60 70 80
GWVHYAIHRP EPHIMLFRRP LNYQQEHQAQ IAK
Length:83
Mass (Da):9,987
Last modified:May 1, 2000 - v1
Checksum:i23BCACF0DEF10C03
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC006929 Genomic DNA. Translation: AAD21505.1.
CP002685 Genomic DNA. Translation: AEC08065.1.
BT010784 mRNA. Translation: AAR24151.1.
BT011257 mRNA. Translation: AAR92293.1.
PIRiB84679.
RefSeqiNP_180364.1. NM_128356.5.
UniGeneiAt.38692.

Genome annotation databases

EnsemblPlantsiAT2G27970.1; AT2G27970.1; AT2G27970.
GeneIDi817341.
KEGGiath:AT2G27970.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC006929 Genomic DNA. Translation: AAD21505.1.
CP002685 Genomic DNA. Translation: AEC08065.1.
BT010784 mRNA. Translation: AAR24151.1.
BT011257 mRNA. Translation: AAR92293.1.
PIRiB84679.
RefSeqiNP_180364.1. NM_128356.5.
UniGeneiAt.38692.

3D structure databases

ProteinModelPortaliQ9SJJ5.
SMRiQ9SJJ5. Positions 3-71.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi2691. 50 interactions.
IntActiQ9SJJ5. 35 interactions.
STRINGi3702.AT2G27970.1.

Proteomic databases

PaxDbiQ9SJJ5.
PRIDEiQ9SJJ5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT2G27970.1; AT2G27970.1; AT2G27970.
GeneIDi817341.
KEGGiath:AT2G27970.

Organism-specific databases

GeneFarmi3299. 116.
TAIRiAT2G27970.

Phylogenomic databases

eggNOGiNOG272189.
HOGENOMiHOG000157009.
InParanoidiQ9SJJ5.
KOiK02219.
OMAiIPKNRLM.
PhylomeDBiQ9SJJ5.

Enzyme and pathway databases

ReactomeiREACT_283684. Cyclin D associated events in G1.

Miscellaneous databases

PROiQ9SJJ5.

Family and domain databases

Gene3Di3.30.170.10. 1 hit.
InterProiIPR000789. Cyclin-dep_kinase_reg-sub.
[Graphical view]
PfamiPF01111. CKS. 1 hit.
[Graphical view]
PRINTSiPR00296. CYCLINKINASE.
SMARTiSM01084. CKS. 1 hit.
[Graphical view]
SUPFAMiSSF55637. SSF55637. 1 hit.
PROSITEiPS00944. CKS_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. Cheuk R.F., Chen H., Kim C.J., Shinn P., Ecker J.R.
    Submitted (JAN-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.
  4. "Genome-wide analysis of core cell cycle genes in Arabidopsis."
    Vandepoele K., Raes J., de Veylder L., Rouze P., Rombauts S., Inze D.
    Plant Cell 14:903-916(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiCKS2_ARATH
AccessioniPrimary (citable) accession number: Q9SJJ5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 10, 2007
Last sequence update: May 1, 2000
Last modified: July 22, 2015
This is version 91 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.