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Q9SJJ5 (CKS2_ARATH) Reviewed, UniProtKB/Swiss-Prot

Last modified June 11, 2014. Version 83. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Cyclin-dependent kinases regulatory subunit 2
Gene names
Name:CKS2
Ordered Locus Names:At2g27970
ORF Names:T1E2.11
OrganismArabidopsis thaliana (Mouse-ear cress) [Reference proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length83 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function By similarity.

Sequence similarities

Belongs to the CKS family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 8383Cyclin-dependent kinases regulatory subunit 2
PRO_0000294095

Sequences

Sequence LengthMass (Da)Tools
Q9SJJ5 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 23BCACF0DEF10C03

FASTA839,987
        10         20         30         40         50         60 
MGQIQYSDKY FDDTFEYRHV VLPPEVAKLL PKNRILSESE WRAIGVQQSR GWVHYAIHRP 

        70         80 
EPHIMLFRRP LNYQQEHQAQ IAK 

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana."
Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D., Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V., Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S., Cronin L.A. expand/collapse author list , Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J., Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M., Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O., Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.
Nature 402:761-768(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Columbia.
[3]Cheuk R.F., Chen H., Kim C.J., Shinn P., Ecker J.R.
Submitted (JAN-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Columbia.
[4]"Genome-wide analysis of core cell cycle genes in Arabidopsis."
Vandepoele K., Raes J., de Veylder L., Rouze P., Rombauts S., Inze D.
Plant Cell 14:903-916(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: GENE FAMILY, NOMENCLATURE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC006929 Genomic DNA. Translation: AAD21505.1.
CP002685 Genomic DNA. Translation: AEC08065.1.
BT010784 mRNA. Translation: AAR24151.1.
BT011257 mRNA. Translation: AAR92293.1.
PIRB84679.
RefSeqNP_180364.1. NM_128356.5.
UniGeneAt.38692.

3D structure databases

ProteinModelPortalQ9SJJ5.
SMRQ9SJJ5. Positions 3-71.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

BioGrid2691. 50 interactions.
IntActQ9SJJ5. 35 interactions.
STRING3702.AT2G27970.1-P.

Proteomic databases

PaxDbQ9SJJ5.
PRIDEQ9SJJ5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT2G27970.1; AT2G27970.1; AT2G27970.
GeneID817341.
KEGGath:AT2G27970.

Organism-specific databases

GeneFarm3299. 116.
TAIRAT2G27970.

Phylogenomic databases

eggNOGNOG272189.
HOGENOMHOG000157009.
InParanoidQ9SJJ5.
KOK02219.
OMAIYNISRT.
PhylomeDBQ9SJJ5.

Gene expression databases

GenevestigatorQ9SJJ5.

Family and domain databases

Gene3D3.30.170.10. 1 hit.
InterProIPR000789. Cyclin-dep_kinase_reg-sub.
[Graphical view]
PfamPF01111. CKS. 1 hit.
[Graphical view]
PRINTSPR00296. CYCLINKINASE.
SMARTSM01084. CKS. 1 hit.
[Graphical view]
SUPFAMSSF55637. SSF55637. 1 hit.
PROSITEPS00944. CKS_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameCKS2_ARATH
AccessionPrimary (citable) accession number: Q9SJJ5
Entry history
Integrated into UniProtKB/Swiss-Prot: July 10, 2007
Last sequence update: May 1, 2000
Last modified: June 11, 2014
This is version 83 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names