Q9SIX5 (Q9SIX5_ARATH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative beta-1,3-glucanase EMBL AAD22313.1

Gene names

Ordered Locus Names:

At2g16230 TAIR At2g16230

Organism

Arabidopsis thaliana (Mouse-ear cress) EMBL AAD22313.1

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	456 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 17 family. RuleBase RU004335

Ontologies

Keywords
Molecular function	Glycosidase RuleBase RU004336 Hydrolase
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9SIX5 [UniParc]. Last modified May 1, 2000. Version 1. Checksum: 0C11AFF5A8711C2C	FASTA	456	48,904
	10 20 30 40 50 60 MALSILFLLL FILFSISPSN AQSFIGVNYG LLSDNLPPPS QTAKLLQSTS IQKVRLYNAD 70 80 90 100 110 120 SSIITSLVGT GIGIVIGVAN GDLPSIASDL NIASQWINSN VLPFYPASNI ILINVGNEVL 130 140 150 160 170 180 LSNDLNLVNQ LLPAMQNVQK ALEAVSLGGK IKVSTVHAMT VLGNSEPPSA GSFAPSYQAG 190 200 210 220 230 240 LKGILQFLSD TGSPFAINPY PFFAYQSDPR PETLAFCLFQ PNPGRVDSNT GIKYMNMFDA 250 260 270 280 290 300 QVDAVHSALK SIGFEKVEVL VAETGWPSTG DSNEVGPSVE NAKAYNGNLI AHLRSMVGTP 310 320 330 340 350 360 LMPGKSIDTY IFALFDENLK PGPSFEQSFG LFKPDLSMAY DIGLTKTTSS QTSQSPQLGK 370 380 390 400 410 420 VTSMGWCVPK EDATQEQLQD SLDWVCGQGI DCGPIMPGGV CFEPNNVASH TAYAMNLYFQ 430 440 450 KSPENPTDCD FSKTARITSE NPSKLFSSSS FISYLL

References

[1]	Lin X., Kaul S., Shea T.P., Fujii C.Y., Shen M., VanAken S.E., Barnstead M.E., Mason T.M., Bowman C.L., Ronning C.M., Benito M.-I., Carrera A.J., Creasy T.H., Buell C.R., Town C.D., Nierman W.C., Fraser C.M., Venter J.C. Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[2]	Town C.D., Kaul S. Submitted (FEB-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AC007047 Genomic DNA. Translation: AAD22313.1.
IPI	IPI00531076.
PIR	B84538.
3D structure databases
HSSP	HSSP built from PDB template 1GHS based on UniProtKB P15737.
ProteinModelPortal	Q9SIX5.
SMR	Q9SIX5. Positions 25-344, 356-455.
ModBase	Search...
Protein family/group databases
CAZy	CBM43. Carbohydrate-Binding Module Family 43. GH17. Glycoside Hydrolase Family 17.
Proteomic databases
PRIDE	Q9SIX5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GenomeReviews	Gene locus AT2G16230 in contig CT485783_GR.
NMPDR	fig|3702.1.peg.8614.
Organism-specific databases
TAIR	At2g16230.
Phylogenomic databases
GeneTree	EPGT00050000003581.
HOGENOM	HBG605194.
InParanoid	Q9SIX5.
OMA	GIKYMNM.
PhylomeDB	Q9SIX5.
Gene expression databases
ArrayExpress	Q9SIX5.
Genevestigator	Q9SIX5.
Family and domain databases
InterPro	IPR000490. Glyco_hydro_17. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. IPR012946. X8. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
Pfam	PF00332. Glyco_hydro_17. 1 hit. PF07983. X8. 1 hit. [Graphical view]
SMART	SM00768. X8. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS00587. GLYCOSYL_HYDROL_F17. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9SIX5_ARATH

Accession

Primary (citable) accession number: Q9SIX5

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	May 1, 2000
Last modified:	December 14, 2011
This is version 63 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)