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Protein

40S ribosomal protein S14-1

Gene

RPS14A

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-ATH-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-ATH-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-ATH-72689. Formation of a pool of free 40S subunits.
R-ATH-72695. Formation of the ternary complex, and subsequently, the 43S complex.
R-ATH-72702. Ribosomal scanning and start codon recognition.
R-ATH-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-ATH-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-ATH-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S14-1
Gene namesi
Name:RPS14A
Ordered Locus Names:At2g36160
ORF Names:F9C22.9
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

TAIRiAT2G36160.

Subcellular locationi

GO - Cellular componenti

  • chloroplast Source: TAIR
  • cytosol Source: TAIR
  • cytosolic ribosome Source: TAIR
  • cytosolic small ribosomal subunit Source: TAIR
  • membrane Source: TAIR
  • plasma membrane Source: TAIR
  • plasmodesma Source: TAIR
  • vacuolar membrane Source: TAIR
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 15015040S ribosomal protein S14-1PRO_0000123344Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei19 – 191PhosphoserineBy similarity

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiQ9SIH0.
PRIDEiQ9SIH0.

Expressioni

Gene expression databases

GenevisibleiQ9SIH0. AT.

Interactioni

Subunit structurei

Interacts with AAK6.1 Publication

Protein-protein interaction databases

BioGridi3532. 2 interactions.
STRINGi3702.AT2G36160.1.

Structurei

3D structure databases

ProteinModelPortaliQ9SIH0.
SMRiQ9SIH0. Positions 16-139.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S11P family.Curated

Phylogenomic databases

eggNOGiKOG0407. Eukaryota.
COG0100. LUCA.
HOGENOMiHOG000111598.
InParanoidiQ9SIH0.
KOiK02955.
OMAiKWGVAHI.
PhylomeDBiQ9SIH0.

Family and domain databases

Gene3Di3.30.420.80. 1 hit.
HAMAPiMF_01310. Ribosomal_S11.
InterProiIPR001971. Ribosomal_S11.
IPR018102. Ribosomal_S11_CS.
[Graphical view]
PANTHERiPTHR11759. PTHR11759. 1 hit.
PfamiPF00411. Ribosomal_S11. 1 hit.
[Graphical view]
PIRSFiPIRSF002131. Ribosomal_S11. 1 hit.
PROSITEiPS00054. RIBOSOMAL_S11. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9SIH0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSKRKTKEPK VDVVTLGPSV REGEQVFGVV HIFASFNDTF IHVTDLSGRE
60 70 80 90 100
TLVRITGGMK VKADRDESSP YAAMLAAQDV AQRCKELGIT AMHVKLRATG
110 120 130 140 150
GNKTKTPGPG AQSALRALAR SGMKIGRIED VTPIPTDSTR RKGGRRGRRL
Length:150
Mass (Da):16,257
Last modified:May 1, 2000 - v1
Checksum:i4FFEC4AC488104C6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC007135 Genomic DNA. Translation: AAD26971.1.
CP002685 Genomic DNA. Translation: AEC09211.1.
AY088120 mRNA. Translation: AAM65665.1.
PIRiD84777.
RefSeqiNP_181158.1. NM_129174.3.
UniGeneiAt.37582.

Genome annotation databases

EnsemblPlantsiAT2G36160.1; AT2G36160.1; AT2G36160.
GeneIDi818188.
GrameneiAT2G36160.1; AT2G36160.1; AT2G36160.
KEGGiath:AT2G36160.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC007135 Genomic DNA. Translation: AAD26971.1.
CP002685 Genomic DNA. Translation: AEC09211.1.
AY088120 mRNA. Translation: AAM65665.1.
PIRiD84777.
RefSeqiNP_181158.1. NM_129174.3.
UniGeneiAt.37582.

3D structure databases

ProteinModelPortaliQ9SIH0.
SMRiQ9SIH0. Positions 16-139.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi3532. 2 interactions.
STRINGi3702.AT2G36160.1.

Proteomic databases

PaxDbiQ9SIH0.
PRIDEiQ9SIH0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT2G36160.1; AT2G36160.1; AT2G36160.
GeneIDi818188.
GrameneiAT2G36160.1; AT2G36160.1; AT2G36160.
KEGGiath:AT2G36160.

Organism-specific databases

TAIRiAT2G36160.

Phylogenomic databases

eggNOGiKOG0407. Eukaryota.
COG0100. LUCA.
HOGENOMiHOG000111598.
InParanoidiQ9SIH0.
KOiK02955.
OMAiKWGVAHI.
PhylomeDBiQ9SIH0.

Enzyme and pathway databases

ReactomeiR-ATH-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-ATH-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-ATH-72689. Formation of a pool of free 40S subunits.
R-ATH-72695. Formation of the ternary complex, and subsequently, the 43S complex.
R-ATH-72702. Ribosomal scanning and start codon recognition.
R-ATH-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-ATH-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-ATH-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Miscellaneous databases

PROiQ9SIH0.

Gene expression databases

GenevisibleiQ9SIH0. AT.

Family and domain databases

Gene3Di3.30.420.80. 1 hit.
HAMAPiMF_01310. Ribosomal_S11.
InterProiIPR001971. Ribosomal_S11.
IPR018102. Ribosomal_S11_CS.
[Graphical view]
PANTHERiPTHR11759. PTHR11759. 1 hit.
PfamiPF00411. Ribosomal_S11. 1 hit.
[Graphical view]
PIRSFiPIRSF002131. Ribosomal_S11. 1 hit.
PROSITEiPS00054. RIBOSOMAL_S11. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "Full-length cDNA from Arabidopsis thaliana."
    Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B., Feldmann K.A.
    Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
  4. "The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome."
    Barakat A., Szick-Miranda K., Chang I.-F., Guyot R., Blanc G., Cooke R., Delseny M., Bailey-Serres J.
    Plant Physiol. 127:398-415(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY ORGANIZATION, NOMENCLATURE.
  5. "Identification of a novel nuclear-localized adenylate kinase 6 from Arabidopsis thaliana as an essential stem growth factor."
    Feng X., Yang R., Zheng X., Zhang F.
    Plant Physiol. Biochem. 61:180-186(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: INTERACTION WITH AAK6.

Entry informationi

Entry nameiRS141_ARATH
AccessioniPrimary (citable) accession number: Q9SIH0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 10, 2003
Last sequence update: May 1, 2000
Last modified: February 17, 2016
This is version 113 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.