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Protein

PLAT domain-containing protein 2

Gene

PLAT2

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Involved in response to abiotic stress.By similarity

Keywords - Biological processi

Stress response

Names & Taxonomyi

Protein namesi
Recommended name:
PLAT domain-containing protein 2Curated
Short name:
AtPLAT21 Publication
Short name:
PLAT domain protein 21 Publication
Gene namesi
Name:PLAT21 Publication
Ordered Locus Names:At2g22170Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

TAIRiAT2G22170.

Subcellular locationi

  • Endoplasmic reticulum By similarity

GO - Cellular componenti

  • chloroplast Source: TAIR
  • membrane Source: TAIR
  • thylakoid Source: TAIR
Complete GO annotation...

Keywords - Cellular componenti

Endoplasmic reticulum

Pathology & Biotechi

Disruption phenotypei

No visible phenotype under normal growth conditions.1 Publication

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2525Sequence analysisAdd
BLAST
Chaini26 – 183158PLAT domain-containing protein 2PRO_5006752344Add
BLAST

Expressioni

Inductioni

Down-regulated by salt stress.1 Publication

Interactioni

Protein-protein interaction databases

STRINGi3702.AT2G22170.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini31 – 158128PLATPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 PLAT domain.PROSITE-ProRule annotation

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG410IY0R. Eukaryota.
ENOG410ZKR3. LUCA.
HOGENOMiHOG000239495.
OMAiHAKCSYQ.
OrthoDBiEOG09360P3N.
PhylomeDBiQ9SIE7.

Family and domain databases

Gene3Di2.60.60.20. 1 hit.
InterProiIPR001024. PLAT/LH2_dom.
[Graphical view]
PfamiPF01477. PLAT. 1 hit.
[Graphical view]
SUPFAMiSSF49723. SSF49723. 1 hit.
PROSITEiPS50095. PLAT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9SIE7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMPRRDVLFL SLLLVIATVS AVALADDEAD CVYTFFLRTG STFKAGTDSI
60 70 80 90 100
ISARVYDKYG DYIGIRNLEA WGGLMGPGYN YYERGNLDIF SGKAPCLPSP
110 120 130 140 150
VCSLNLTSDG SGDHHGWYVN YVEVTTAGVH AKCSYQSFDV EQWLASDTSP
160 170 180
YELSAVRNNC PVSLRESVGR VGSEIRKTLS WIV
Length:183
Mass (Da):20,130
Last modified:May 1, 2000 - v1
Checksum:iB0322292368BB92D
GO

Sequence cautioni

The sequence AAM62648 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.Curated

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti36 – 361F → Y in AAM62648 (Ref. 4) Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC007168 Genomic DNA. Translation: AAD23623.1.
CP002685 Genomic DNA. Translation: AEC07274.1.
BT002824 mRNA. Translation: AAO22643.1.
BT004384 mRNA. Translation: AAO42378.1.
AY085421 mRNA. Translation: AAM62648.1. Different initiation.
PIRiG84609.
RefSeqiNP_565527.1. NM_127785.3.
UniGeneiAt.14443.
At.67086.

Genome annotation databases

EnsemblPlantsiAT2G22170.1; AT2G22170.1; AT2G22170.
GeneIDi816751.
GrameneiAT2G22170.1; AT2G22170.1; AT2G22170.
KEGGiath:AT2G22170.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC007168 Genomic DNA. Translation: AAD23623.1.
CP002685 Genomic DNA. Translation: AEC07274.1.
BT002824 mRNA. Translation: AAO22643.1.
BT004384 mRNA. Translation: AAO42378.1.
AY085421 mRNA. Translation: AAM62648.1. Different initiation.
PIRiG84609.
RefSeqiNP_565527.1. NM_127785.3.
UniGeneiAt.14443.
At.67086.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT2G22170.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT2G22170.1; AT2G22170.1; AT2G22170.
GeneIDi816751.
GrameneiAT2G22170.1; AT2G22170.1; AT2G22170.
KEGGiath:AT2G22170.

Organism-specific databases

TAIRiAT2G22170.

Phylogenomic databases

eggNOGiENOG410IY0R. Eukaryota.
ENOG410ZKR3. LUCA.
HOGENOMiHOG000239495.
OMAiHAKCSYQ.
OrthoDBiEOG09360P3N.
PhylomeDBiQ9SIE7.

Family and domain databases

Gene3Di2.60.60.20. 1 hit.
InterProiIPR001024. PLAT/LH2_dom.
[Graphical view]
PfamiPF01477. PLAT. 1 hit.
[Graphical view]
SUPFAMiSSF49723. SSF49723. 1 hit.
PROSITEiPS50095. PLAT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiPLAT2_ARATH
AccessioniPrimary (citable) accession number: Q9SIE7
Secondary accession number(s): Q8LEG8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 7, 2016
Last sequence update: May 1, 2000
Last modified: September 7, 2016
This is version 107 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.