Q9SFF6 (Q9SFF6_ARATH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
AT3g05910/F2O10_3 EMBL AAL16135.1

Submitted name:
Pectin lyase-like protein EMBL AEE74314.1
Submitted name:
Putative pectinacetylesterase EMBL AAF23225.1

Gene names

Name:	F2O10.13 EMBL AAF23225.1
Ordered Locus Names:	At3g05910 TAIR At3g05910
ORF Names:	AT3G05910 EMBL AEE74314.1

Organism

Arabidopsis thaliana (Mouse-ear cress) EMBL AAF23225.1

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	415 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Molecular function	Lyase EMBL AEE74314.1
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular function	lyase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9SFF6 [UniParc]. Last modified May 1, 2000. Version 1. Checksum: 4131CC9C66D35269	FASTA	415	46,327
	10 20 30 40 50 60 MVKLLLVGFV VAGIILGTQA NEYLDFNVTE IDRIEELEFG FSKYSSNLNP LMVGLTLIRG 70 80 90 100 110 120 ADSGAVCLDG TLPGYHLHRG HGSGANSWLI QLEGGGWCNN IRTCVYRKTT RRGSSNYMEK 130 140 150 160 170 180 QLQFTGILSD KAQENPDFFN WNRVKLRYCD GASFSGDGQN QAAQLQFRGE RIWRAAIDDL 190 200 210 220 230 240 KANGMRYANQ ALLSGCSAGG LAAILRCDEF RNLFPGSTKV KCLSDAGLFL DTADVSGGRT 250 260 270 280 290 300 IRNLYNGVVE LQSVKNNLPR ICTNHLDPTS CFFPQNLISQ MKTPLFIVNA AYDTWQIQSS 310 320 330 340 350 360 IAPTSADPSG FWHDCRLNHG KCTPAQLRFL QGFREQMLRV VKGFSMSRQN GLFINSCFAH 370 380 390 400 410 CQTERQDTWF ADDSPVIRKK AVAIAVGDWY FDRAEVKLVD CPYPCDKSCH NLVFR

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana." European Union Chromosome 3 Arabidopsis Sequencing Consortium, Institute for Genomic Research, Kazusa DNA Research Institute Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B., Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N., Artiguenave F. , Robert C., Brottier P., Wincker P., Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H., Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A., Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H., Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J., Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B., Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D., de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E., Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G., Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X., Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M., Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B., Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J., Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C., Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y., Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K., Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S. Nature 408:820-822(2000) [PubMed: 11130713] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[2]	"Arabidopsis Open Reading Frame (ORF) Clones." Yamada K., Banh J., Chan M.M., Chang C.H., Chang E., Dale J.M., Deng J.M., Goldsmith A.D., Lee J.M., Onodera C.S., Quach H.L., Tang C., Toriumi M., Wu H.C., Yamamura Y., Yu G., Bowser L., Carninci P. , Chen H., Cheuk R., Hayashizaki Y., Ishida J., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Kim C., Lam B., Lin J., Meyers M.C., Miranda M., Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Shinozaki K., Davis R.W., Ecker J.R., Theologis A. Submitted (APR-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[3]	"Arabidopsis Full Length cDNA Clones." Yamada K., Liu S.X., Sakano H., Pham P.K., Banh J., Chung M.K., Goldsmith A.D., Lee J.M., Quach H.L., Toriumi M., Yu G., Bowser L., Carninci P., Chen H., Cheuk R., Hayashizaki Y., Ishida J., Jones T. , Kamiya A., Karlin-Neumann G., Kawai J., Kim C., Lam B., Lin J., Miranda M., Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Shinozaki K., Davis R.W., Ecker J.R., Theologis A. Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[4]	"Arabidopsis cDNA clones." Cheuk R., Chen H., Kim C.J., Koesema E., Meyers M.C., Banh J., Bowser L., Carninci P., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., Jiang P.X., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B. , Lee J.M., Lin J., Liu S.X., Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Pham P.K., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M., Yamada K., Yamamura Y., Yu G., Yu S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R. Submitted (OCT-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[5]	Arabidopsis TAIR10 Release Swarbreck D., Lamesch P., Wilks C., Huala E. Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[6]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[7]	"Arabidopsis thaliana chromosome III BAC F2O10 genomic sequence." Lin X., Kaul S., Town C.D., Benito M.-I., Creasy T.H., Haas B., Ronning C.M., Koo H., Fujii C.Y., Utterback T.R., Barnstead M.E., Bowman C.L., White O., Nierman W.C., Fraser C.M. Submitted (JAN-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AC013454 Genomic DNA. Translation: AAF23225.1. AY050847 mRNA. Translation: AAK92782.1. AF428303 mRNA. Translation: AAL16135.1. AY096751 mRNA. Translation: AAM20385.1. CP002686 Genomic DNA. Translation: AEE74314.1.
IPI	IPI00545629.
RefSeq	NP_566263.1. NM_111465.4.
UniGene	At.10321.
3D structure databases
ProteinModelPortal	Q9SFF6.
ModBase	Search...
Proteomic databases
PRIDE	Q9SFF6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	AT3G05910.1; AT3G05910.1; AT3G05910.
GeneID	819760.
GenomeReviews	Gene locus AT3G05910 in contig BA000014_GR.
KEGG	ath:AT3G05910.
NMPDR	fig|3702.1.peg.12584.
Organism-specific databases
TAIR	At3g05910.
Phylogenomic databases
GeneTree	EPGT00050000006142.
HOGENOM	HBG593161.
InParanoid	Q9SFF6.
OMA	IRTCVYR.
PhylomeDB	Q9SFF6.
ProtClustDB	CLSN2688100.
Gene expression databases
ArrayExpress	Q9SFF6.
Genevestigator	Q9SFF6.
Family and domain databases
InterPro	IPR004963. Pec_acetylest. [Graphical view]
PANTHER	PTHR21562:SF1. Pec_acetylest. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q9SFF6_ARATH

Accession

Primary (citable) accession number: Q9SFF6

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	May 1, 2000
Last modified:	January 25, 2012
This is version 54 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)