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Protein

F-box protein At3g07870

Gene

At3g07870

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
F-box protein At3g07870
Gene namesi
Ordered Locus Names:At3g07870
ORF Names:F17A17.21
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 3

Organism-specific databases

AraportiAT3G07870.
TAIRilocus:2077452. AT3G07870.

Subcellular locationi

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002834061 – 417F-box protein At3g07870Add BLAST417

Proteomic databases

PaxDbiQ9SFC7.

Expressioni

Gene expression databases

ExpressionAtlasiQ9SFC7. baseline and differential.
GenevisibleiQ9SFC7. AT.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT3G07870.1.

Structurei

3D structure databases

ProteinModelPortaliQ9SFC7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini22 – 68F-boxPROSITE-ProRule annotationAdd BLAST47

Phylogenomic databases

eggNOGiENOG410IF3A. Eukaryota.
ENOG410YVBU. LUCA.
HOGENOMiHOG000090481.
InParanoidiQ9SFC7.
OMAiKESWGKE.
OrthoDBiEOG09360BKU.
PhylomeDBiQ9SFC7.

Family and domain databases

Gene3Di2.120.10.80. 1 hit.
InterProiView protein in InterPro
IPR013187. F-box-assoc_dom_typ3.
IPR017451. F-box-assoc_interact_dom.
IPR001810. F-box_dom.
IPR015915. Kelch-typ_b-propeller.
PfamiView protein in Pfam
PF00646. F-box. 1 hit.
PF08268. FBA_3. 1 hit.
SMARTiView protein in SMART
SM00256. FBOX. 1 hit.
SUPFAMiSSF81383. SSF81383. 1 hit.
TIGRFAMsiTIGR01640. F_box_assoc_1. 1 hit.
PROSITEiView protein in PROSITE
PS50181. FBOX. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9SFC7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASEKSFKKR KITDDVDGVG VGGGLESLPE DIIADIFSRL PISSIARLMF
60 70 80 90 100
VCRSWRSVLT QHGRLSSSSS SPTKPCLLLH CDSPIRNGLH FLDLSEEEKR
110 120 130 140 150
IKTKKFTLRF ASSMPEFDVV GSCNGLLCLS DSLYNDSLYL YNPFTTNSLE
160 170 180 190 200
LPECSNKYHD QELVFGFGFH EMTKEYKVLK IVYFRGSSSN NNGIYRGRGR
210 220 230 240 250
IQYKQSEVQI LTLSSKTTDQ SLSWRSLGKA PYKFVKRSSE ALVNGRLHFV
260 270 280 290 300
TRPRRHVPDR KFVSFDLEDE EFKEIPKPDC GGLNRTNHRL VNLKGCLCAV
310 320 330 340 350
VYGNYGKLDI WVMKTYGVKE SWGKEYSIGT YLPKGLKQNL DRPMWIWKNA
360 370 380 390 400
ENGKVVRVLC LLENGEILLE YKSRVLVAYD PKLGKFKDLL FHGLPNWFHT
410
VVHAGTLSWF DTPLDLW
Length:417
Mass (Da):47,682
Last modified:May 1, 2000 - v1
Checksum:iC8473D7C25F4CD82
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC013483 Genomic DNA. Translation: AAF21197.1.
CP002686 Genomic DNA. Translation: AEE74613.1.
AF424614 mRNA. Translation: AAL11607.1.
BT025979 mRNA. Translation: ABG25068.1.
RefSeqiNP_566322.1. NM_111666.4.
UniGeneiAt.25406.

Genome annotation databases

EnsemblPlantsiAT3G07870.1; AT3G07870.1; AT3G07870.
GeneIDi819978.
GrameneiAT3G07870.1; AT3G07870.1; AT3G07870.
KEGGiath:AT3G07870.

Similar proteinsi

Entry informationi

Entry nameiFB135_ARATH
AccessioniPrimary (citable) accession number: Q9SFC7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 3, 2007
Last sequence update: May 1, 2000
Last modified: August 30, 2017
This is version 92 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names