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Q9SE26

- ACEA_DENCR

UniProt

Q9SE26 - ACEA_DENCR

Protein

Isocitrate lyase

Gene

ICL

Organism
Dendrobium crumenatum (Tropical pigeon orchid)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 73 (01 Oct 2014)
      Sequence version 1 (01 May 2000)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Isocitrate = succinate + glyoxylate.PROSITE-ProRule annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei212 – 2121Curated

    GO - Molecular functioni

    1. isocitrate lyase activity Source: UniProtKB-EC

    GO - Biological processi

    1. glyoxylate cycle Source: UniProtKB-UniPathway
    2. tricarboxylic acid cycle Source: UniProtKB-KW

    Keywords - Molecular functioni

    Lyase

    Keywords - Biological processi

    Glyoxylate bypass, Tricarboxylic acid cycle

    Enzyme and pathway databases

    UniPathwayiUPA00703; UER00719.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Isocitrate lyase (EC:4.1.3.1)
    Short name:
    ICL
    Short name:
    Isocitrase
    Short name:
    Isocitratase
    Gene namesi
    Name:ICL
    OrganismiDendrobium crumenatum (Tropical pigeon orchid)
    Taxonomic identifieri51096 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaAsparagalesOrchidaceaeEpidendroideaeDendrobiinaeDendrobium

    Subcellular locationi

    GO - Cellular componenti

    1. glyoxysome Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Glyoxysome, Peroxisome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 574574Isocitrate lyasePRO_0000068805Add
    BLAST

    Expressioni

    Developmental stagei

    Expressed maximally during postgerminative growth.

    Interactioni

    Subunit structurei

    Homotetramer.By similarity

    Structurei

    3D structure databases

    ProteinModelPortaliQ9SE26.
    SMRiQ9SE26. Positions 8-534.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Motif

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Motifi572 – 5743Microbody targeting signalSequence Analysis

    Sequence similaritiesi

    Family and domain databases

    Gene3Di3.20.20.60. 2 hits.
    InterProiIPR006254. Isocitrate_lyase.
    IPR018523. Isocitrate_lyase_ph_CS.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view]
    PANTHERiPTHR21631:SF3. PTHR21631:SF3. 1 hit.
    PfamiPF00463. ICL. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001362. Isocit_lyase. 1 hit.
    SUPFAMiSSF51621. SSF51621. 1 hit.
    TIGRFAMsiTIGR01346. isocit_lyase. 1 hit.
    PROSITEiPS00161. ISOCITRATE_LYASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q9SE26-1 [UniParc]FASTAAdd to Basket

    « Hide

    MASSSVPPMI TEEEARFEAE VSAVESWWRT DRFRLTRRPY SARDVVSLRG    50
    TLHHSYASDQ MAKKLWRTLK SHQSAGTASR TFGALDPVQV TMMAKHLDTI 100
    YVSGWQCSST HTATNEPGPD LADYPYNTVP NKVEHLFFAQ LYHDRKQHEA 150
    RVSMTREQRA KTPYVDYLRP IIADGDTGFG GATATVKLCK LFVERGAAGV 200
    HIEDQSSVTK KCGHMAGKVL VAVSEHINRL VAARLQFDVM GVETVLVART 250
    DAVAATLIQS NVDLRDHQFI LGATNPDFKR RSLAAVLSAA MAAGKTGAVL 300
    QAIEDDWLSR AGLMTFSDAV INGINRQNLP EYEKQRRLNE WAAATEYSKC 350
    VSNEQGREIA ERLGAGEIFW DWDIARTREG FYRFRGSVEA AVVRGRAFAP 400
    HADLIWMETS SPDLVECGKF AQGMKASHPE IMLAYNLSPS FNWDAAGMTD 450
    EEMRDFIPRI AKMGFCWQFI TLGGFHADAL VTDTFAREFA KQGMLAYVER 500
    IQREERNNGV DTLAHQKWSG ANYYDRYLKT VQGGISSTAA MGKGVTEEQF 550
    KEESRTGTRG LDRGGITVNA KSRL 574
    Length:574
    Mass (Da):63,993
    Last modified:May 1, 2000 - v1
    Checksum:i0B568ADE3248DE2E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF193815 mRNA. Translation: AAF04598.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF193815 mRNA. Translation: AAF04598.1 .

    3D structure databases

    ProteinModelPortali Q9SE26.
    SMRi Q9SE26. Positions 8-534.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Enzyme and pathway databases

    UniPathwayi UPA00703 ; UER00719 .

    Family and domain databases

    Gene3Di 3.20.20.60. 2 hits.
    InterProi IPR006254. Isocitrate_lyase.
    IPR018523. Isocitrate_lyase_ph_CS.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view ]
    PANTHERi PTHR21631:SF3. PTHR21631:SF3. 1 hit.
    Pfami PF00463. ICL. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001362. Isocit_lyase. 1 hit.
    SUPFAMi SSF51621. SSF51621. 1 hit.
    TIGRFAMsi TIGR01346. isocit_lyase. 1 hit.
    PROSITEi PS00161. ISOCITRATE_LYASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Sequence analysis of DcrIcl, an isocitrate lyase gene from the tropical orchid, Dendrobium crumenatum."
      Vellupillai M., Goh C.-J., Swarup S.
      Plant Gene Register PGR99-178
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].

    Entry informationi

    Entry nameiACEA_DENCR
    AccessioniPrimary (citable) accession number: Q9SE26
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 1, 2000
    Last sequence update: May 1, 2000
    Last modified: October 1, 2014
    This is version 73 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3