Beta-galactosidase 7 precursor - Arabidopsis thaliana (Mouse-ear cress)

Contribute

Read comments (?) or add your own

Q9SCV5 (BGAL7_ARATH) Reviewed, UniProtKB/Swiss-Prot

Last modified December 14, 2011. Version 69. History...

Clusters with 100%, 90%, 50% identity |

Documents (3) |

Third-party data

text xml rdf/xml gff fasta

to top of page

Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents Customize order

to top of page

Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents Customize order

Names and origin

Protein names

Recommended name:
Beta-galactosidase 7
Short name=Lactase 7
EC=3.2.1.23

Gene names

Name:	BGAL7
Ordered Locus Names:	At5g20710
ORF Names:	T1M15.110

Organism

Arabidopsis thaliana (Mouse-ear cress)

Taxonomic identifier

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	826 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Evidence at transcript level

General annotation (Comments)

Catalytic activity	Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.
Subcellular location	Secreted › extracellular space › apoplast Potential.
Tissue specificity	Expressed in flowers. Ref.5
Sequence similarities	Belongs to the glycosyl hydrolase 35 family. Contains 1 SUEL-type lectin domain.
Sequence caution	The sequence AAK76465.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
Cellular component	Apoplast Secreted
Domain	Signal
Molecular function	Glycosidase Hydrolase
PTM	Glycoprotein
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	apoplast Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	beta-galactosidase activity Traceable author statement. Source: TAIR cation binding Inferred from electronic annotation. Source: InterPro sugar binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Signal peptide

25

Potential

Chain

801

Beta-galactosidase 7

PRO_0000293092

Regions

Domain

87

SUEL-type lectin

Sites

Active site

1

Proton donor Potential

Active site

1

Nucleophile Potential

Amino acid modifications

Glycosylation

1

N-linked (GlcNAc...) Potential

Glycosylation

1

N-linked (GlcNAc...) Potential

Glycosylation

1

N-linked (GlcNAc...) Potential

Glycosylation

1

N-linked (GlcNAc...) Potential

Glycosylation

1

N-linked (GlcNAc...) Potential

Glycosylation

1

N-linked (GlcNAc...) Potential

Glycosylation

1

N-linked (GlcNAc...) Potential

Glycosylation

1

N-linked (GlcNAc...) Potential

Glycosylation

1

N-linked (GlcNAc...) Potential

Experimental info

Sequence conflict

1

E → K in AAK76465. Ref.4

Sequences

Sequence

Length

Mass (Da)

Tools

Q9SCV5 [UniParc].

Last modified July 10, 2007. Version 2.
Checksum: 3EDA7EBA3E5D234B
Show »

826

92,712

        10         20         30         40         50         60 
MKMKHFTRLL SLFFILITSL SLAKSTIVSH DERAITINGK RRILLSGSIH YPRSTADMWP 

        70         80         90        100        110        120 
DLINKAKDGG LDAIETYVFW NAHEPKRREY DFSGNLDVVR FIKTIQDAGL YSVLRIGPYV 

       130        140        150        160        170        180 
CAEWNYGGFP VWLHNMPNMK FRTVNPSFMN EMQNFTTKIV KMMKEEKLFA SQGGPIILAQ 

       190        200        210        220        230        240 
IENEYGNVIS SYGAEGKAYI DWCANMANSL DIGVPWLMCQ QPNAPQPMLE TCNGFYCDQY 

       250        260        270        280        290        300 
EPTNPSTPKM WTENWTGWFK NWGGKHPYRT AEDLAFSVAR FFQTGGTFQN YYMYHGGTNF 

       310        320        330        340        350        360 
GRVAGGPYIT TSYDYHAPLD EFGNLNQPKW GHLKQLHTVL KSMEKSLTYG NISRIDLGNS 

       370        380        390        400        410        420 
IKATIYTTKE GSSCFIGNVN ATADALVNFK GKDYHVPAWS VSVLPDCDKE AYNTAKVNTQ 

       430        440        450        460        470        480 
TSIMTEDSSK PERLEWTWRP ESAQKMILKG SGDLIAKGLV DQKDVTNDAS DYLWYMTRLH 

       490        500        510        520        530        540 
LDKKDPLWSR NMTLRVHSNA HVLHAYVNGK YVGNQFVKDG KFDYRFERKV NHLVHGTNHI 

       550        560        570        580        590        600 
SLLSVSVGLQ NYGPFFESGP TGINGPVSLV GYKGEETIEK DLSQHQWDYK IGLNGYNDKL 

       610        620        630        640        650        660 
FSIKSVGHQK WANEKLPTGR MLTWYKAKFK APLGKEPVIV DLNGLGKGEA WINGQSIGRY 

       670        680        690        700        710        720 
WPSFNSSDDG CKDECDYRGA YGSDKCAFMC GKPTQRWYHV PRSFLNASGH NTITLFEEMG 

       730        740        750        760        770        780 
GNPSMVNFKT VVVGTVCARA HEHNKVELSC HNRPISAVKF ASFGNPLGHC GSFAVGTCQG 

       790        800        810        820 
DKDAAKTVAK ECVGKLNCTV NVSSDTFGST LDCGDSPKKL AVELEC

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana." Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E., Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K. Fransz P.F. Nature 408:823-826(2000) [PubMed: 11130714] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[2]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Columbia.
[3]	"The beta-galactosidases are encoding by a multigene family in Arabidopsis thaliana." Gy I., Kreis M., Lecharny A. Submitted (OCT-1999) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 39-826.
[4]	"Empirical analysis of transcriptional activity in the Arabidopsis genome." Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. Ecker J.R. Science 302:842-846(2003) [PubMed: 14593172] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 202-826. Strain: cv. Columbia.
[5]	"Functional genomic analysis of Arabidopsis thaliana glycoside hydrolase family 35." Ahn Y.O., Zheng M., Bevan D.R., Esen A., Shiu S.-H., Benson J., Peng H.-P., Miller J.T., Cheng C.-L., Poulton J.E., Shih M.-C. Phytochemistry 68:1510-1520(2007) [PubMed: 17466346] [Abstract] Cited for: TISSUE SPECIFICITY, GENE FAMILY, NOMENCLATURE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AF296832 Genomic DNA. No translation available. CP002688 Genomic DNA. Translation: AED92880.1. AJ270303 mRNA. Translation: CAB64743.1. AY045791 mRNA. Translation: AAK76465.1. Different initiation.
IPI	IPI00533525.
RefSeq	NP_568399.4. NM_122078.4.
UniGene	At.22291.
3D structure databases
ProteinModelPortal	Q9SCV5.
SMR	Q9SCV5. Positions 54-143, 740-826.
ModBase	Search...
Protein-protein interaction databases
STRING	Q9SCV5.
Protein family/group databases
CAZy	GH35. Glycoside Hydrolase Family 35.
Proteomic databases
PRIDE	Q9SCV5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	AT5G20710.1; AT5G20710.1; AT5G20710.
GeneID	832194.
GenomeReviews	Gene locus AT5G20710 in contig BA000015_GR.
KEGG	ath:AT5G20710.
NMPDR	fig\|3702.1.peg.24283.
Organism-specific databases
GeneFarm	534. 90.
TAIR	At5g20710.
Phylogenomic databases
eggNOG	KOG0496.
GeneTree	EPGT00070000027970.
HOGENOM	HBG318019.
InParanoid	Q9SCV5.
OMA	HDERAIT.
PhylomeDB	Q9SCV5.
ProtClustDB	CLSN2918868.
Gene expression databases
Genevestigator	Q9SCV5.
Family and domain databases
InterPro	IPR008979. Galactose-bd-like. IPR019801. Glyco_hydro_35_CS. IPR013781. Glyco_hydro_subgr_catalytic. IPR001944. Glycoside_Hdrlase_35. IPR017853. Glycoside_hydrolase_SF. IPR000922. Lectin_gal-bd_dom. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PANTHER	PTHR23421. Glyco_hydro_35. 1 hit.
Pfam	PF02140. Gal_Lectin. 1 hit. PF01301. Glyco_hydro_35. 1 hit. [Graphical view]
PRINTS	PR00742. GLHYDRLASE35.
SUPFAM	SSF49785. Gal_bind_like. 2 hits. SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS01182. GLYCOSYL_HYDROL_F35. 1 hit. PS50228. SUEL_LECTIN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

BGAL7_ARATH

Accession

Primary (citable) accession number: Q9SCV5
Secondary accession number(s): Q94AU4

Entry history

Integrated into UniProtKB/Swiss-Prot:	July 10, 2007
Last sequence update:	July 10, 2007
Last modified:	December 14, 2011
This is version 69 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Plant Protein Annotation Program

Relevant documents

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names

SIMILARITY comments

Index of protein domains and families

to top of page

Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents