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Protein

Beta-galactosidase 13

Gene

BGAL13

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei200Proton donorSequence analysis1
Active sitei271NucleophileSequence analysis1

GO - Molecular functioni

  • beta-galactosidase activity Source: TAIR
  • carbohydrate binding Source: InterPro

GO - Biological processi

Keywordsi

Molecular functionGlycosidase, Hydrolase

Enzyme and pathway databases

BioCyciARA:AT2G16730-MONOMER

Protein family/group databases

CAZyiGH35 Glycoside Hydrolase Family 35

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-galactosidase 13 (EC:3.2.1.23)
Short name:
Lactase 13
Gene namesi
Name:BGAL13
Ordered Locus Names:At2g16730
ORF Names:T24I21.14
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

AraportiAT2G16730
TAIRilocus:2059899 AT2G16730

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Apoplast, Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 27Sequence analysisAdd BLAST27
ChainiPRO_500006588628 – 848Beta-galactosidase 13Add BLAST821

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi107N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi272N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi303N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi376N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi398N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi782N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi787N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi817N-linked (GlcNAc...) asparagineSequence analysis1

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDbiQ9SCU9
PRIDEiQ9SCU9

Expressioni

Tissue specificityi

Ubiquitous, with higher expression levels in roots, flowers and siliques.1 Publication

Gene expression databases

ExpressionAtlasiQ9SCU9 differential
GenevisibleiQ9SCU9 AT

Interactioni

Protein-protein interaction databases

STRINGi3702.AT2G16730.1

Structurei

3D structure databases

ProteinModelPortaliQ9SCU9
SMRiQ9SCU9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini754 – 843SUEL-type lectinPROSITE-ProRule annotationAdd BLAST90

Sequence similaritiesi

Belongs to the glycosyl hydrolase 35 family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiKOG0496 Eukaryota
COG1874 LUCA
HOGENOMiHOG000239919
InParanoidiQ9SCU9
OMAiWGHRVGL
OrthoDBiEOG093601FL
PhylomeDBiQ9SCU9

Family and domain databases

Gene3Di2.60.120.260, 2 hits
InterProiView protein in InterPro
IPR008979 Galactose-bd-like_sf
IPR031330 Gly_Hdrlase_35_cat
IPR019801 Glyco_hydro_35_CS
IPR001944 Glycoside_Hdrlase_35
IPR017853 Glycoside_hydrolase_SF
IPR000922 Lectin_gal-bd_dom
PANTHERiPTHR23421 PTHR23421, 1 hit
PfamiView protein in Pfam
PF02140 Gal_Lectin, 1 hit
PF01301 Glyco_hydro_35, 1 hit
PRINTSiPR00742 GLHYDRLASE35
SUPFAMiSSF49785 SSF49785, 2 hits
SSF51445 SSF51445, 1 hit
PROSITEiView protein in PROSITE
PS01182 GLYCOSYL_HYDROL_F35, 1 hit
PS50228 SUEL_LECTIN, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9SCU9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKIHSSDHSW LLLAVLVILL SFSGALSSDD KEKKTKSVDK KKEVTYDGTS
60 70 80 90 100
LIINGNRELL YSGSIHYPRS TPEMWPNIIK RAKQGGLNTI QTYVFWNVHE
110 120 130 140 150
PEQGKFNFSG RADLVKFIKL IEKNGLYVTL RLGPFIQAEW THGGLPYWLR
160 170 180 190 200
EVPGIFFRTD NEPFKEHTER YVKVVLDMMK EEKLFASQGG PIILGQIENE
210 220 230 240 250
YSAVQRAYKE DGLNYIKWAS KLVHSMDLGI PWVMCKQNDA PDPMINACNG
260 270 280 290 300
RHCGDTFPGP NKDNKPSLWT ENWTTQFRVF GDPPAQRSVE DIAYSVARFF
310 320 330 340 350
SKNGTHVNYY MYHGGTNFGR TSAHYVTTRY YDDAPLDEFG LEREPKYGHL
360 370 380 390 400
KHLHNALNLC KKALLWGQPR VEKPSNETEI RYYEQPGTKV CAAFLANNNT
410 420 430 440 450
EAAEKIKFRG KEYLIPHRSI SILPDCKTVV YNTGEIISHH TSRNFMKSKK
460 470 480 490 500
ANKNFDFKVF TESVPSKIKG DSFIPVELYG LTKDESDYGW YTTSFKIDDN
510 520 530 540 550
DLSKKKGGKP NLRIASLGHA LHVWLNGEYL GNGHGSHEEK SFVFQKPVTL
560 570 580 590 600
KEGENHLTML GVLTGFPDSG SYMEHRYTGP RSVSILGLGS GTLDLTEENK
610 620 630 640 650
WGNKVGMEGE RLGIHAEEGL KKVKWEKASG KEPGMTWYQT YFDAPESQSA
660 670 680 690 700
AAIRMNGMGK GLIWVNGEGV GRYWMSFLSP LGQPTQIEYH IPRSFLKPKK
710 720 730 740 750
NLLVIFEEEP NVKPELIDFV IVNRDTVCSY IGENYTPSVR HWTRKNDQVQ
760 770 780 790 800
AITDDVHLTA NLKCSGTKKI SAVEFASFGN PNGTCGNFTL GSCNAPVSKK
810 820 830 840
VVEKYCLGKA ECVIPVNKST FEQDKKDSCP KVEKKLAVQV KCGRDKKN
Length:848
Mass (Da):95,900
Last modified:May 1, 2000 - v1
Checksum:i1AF1AF48C1FA5F1B
GO

Sequence cautioni

The sequence AAD24606 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ270309 mRNA Translation: CAB64749.1
AC005825 Genomic DNA Translation: AAD24606.1 Sequence problems.
CP002685 Genomic DNA Translation: AEC06532.1
PIRiE84543
RefSeqiNP_179264.2, NM_127225.3
UniGeneiAt.707

Genome annotation databases

EnsemblPlantsiAT2G16730.1; AT2G16730.1; AT2G16730
GeneIDi816174
GrameneiAT2G16730.1; AT2G16730.1; AT2G16730
KEGGiath:AT2G16730

Similar proteinsi

Entry informationi

Entry nameiBGA13_ARATH
AccessioniPrimary (citable) accession number: Q9SCU9
Secondary accession number(s): Q9SLE5
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 10, 2007
Last sequence update: May 1, 2000
Last modified: May 23, 2018
This is version 124 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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