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Q9SCS6

- Q9SCS6_ARATH

UniProt

Q9SCS6 - Q9SCS6_ARATH

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Protein
Submitted name:

AT3g50480/T20E23_80

Gene

T20E23_80

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
AT3g50480/T20E23_80Imported
Submitted name:
At3g50480/T20E23_80Imported
Submitted name:
HR4Imported
Submitted name:
Putative uncharacterized protein T20E23_80Imported
Submitted name:
RPW8-like protein 4Imported
Gene namesi
Name:T20E23_80Imported
Synonyms:HR4Imported
Ordered Locus Names:At3g50480Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 3

Organism-specific databases

TAIRiAT3G50480.

Expressioni

Gene expression databases

ExpressionAtlasiQ9SCS6. baseline and differential.
GenevestigatoriQ9SCS6.

Family & Domainsi

Phylogenomic databases

PhylomeDBiQ9SCS6.

Family and domain databases

InterProiIPR008808. Powdery_mildew-R_dom.
[Graphical view]
PfamiPF05659. RPW8. 1 hit.
[Graphical view]
PROSITEiPS51153. RPW8. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9SCS6-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MPIAELAVIK TVGGPLIAAA LGVGAQVIYD GFRKGKDTSI INRLGRTMES
60 70 80 90 100
ISPVRDRIGK LSNVEGKPFR EVHESLTRLL EDAKSIIEKY WKLRWSRHVC
110 120 130 140 150
RKYRYIKKLE SIELELVRVA REIQVHQWTD IKEMKAIQVH QWTDIKEMKA
160 170 180 190 200
IQVDQWTDIK EMKAIQVDQW IDIKEMKAIQ VDQWTDIKEM KAQISEKHNK
Length:200
Mass (Da):23,389
Last modified:May 1, 2000 - v1
Checksum:i6D18726A79A3C679
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF361849 mRNA. Translation: AAK32861.1.
BT000848 mRNA. Translation: AAN38685.1.
FJ267632 Genomic DNA. Translation: ACJ05894.1.
CP002686 Genomic DNA. Translation: AEE78671.1.
AL133363 Genomic DNA. Translation: CAB62477.1.
PIRiT46079.
RefSeqiNP_566933.1. NM_114908.4.
UniGeneiAt.66512.

Genome annotation databases

EnsemblPlantsiAT3G50480.1; AT3G50480.1; AT3G50480.
GeneIDi824212.
KEGGiath:AT3G50480.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF361849 mRNA. Translation: AAK32861.1 .
BT000848 mRNA. Translation: AAN38685.1 .
FJ267632 Genomic DNA. Translation: ACJ05894.1 .
CP002686 Genomic DNA. Translation: AEE78671.1 .
AL133363 Genomic DNA. Translation: CAB62477.1 .
PIRi T46079.
RefSeqi NP_566933.1. NM_114908.4.
UniGenei At.66512.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT3G50480.1 ; AT3G50480.1 ; AT3G50480 .
GeneIDi 824212.
KEGGi ath:AT3G50480.

Organism-specific databases

TAIRi AT3G50480.

Phylogenomic databases

PhylomeDBi Q9SCS6.

Gene expression databases

ExpressionAtlasi Q9SCS6. baseline and differential.
Genevestigatori Q9SCS6.

Family and domain databases

InterProi IPR008808. Powdery_mildew-R_dom.
[Graphical view ]
Pfami PF05659. RPW8. 1 hit.
[Graphical view ]
PROSITEi PS51153. RPW8. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE.
  2. "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana."
    European Union Chromosome 3 Arabidopsis Sequencing Consortium, Institute for Genomic Research, Kazusa DNA Research Institute
    Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B., Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N., Artiguenave F.
    , Robert C., Brottier P., Wincker P., Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H., Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A., Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H., Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J., Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B., Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D., de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E., Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G., Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X., Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M., Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B., Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J., Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C., Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y., Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K., Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    Nature 408:820-822(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. ColumbiaImported.
  3. EU Arabidopsis sequencing project
    Submitted (APR-2000) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  4. Cited for: NUCLEOTIDE SEQUENCE.
  5. Cited for: NUCLEOTIDE SEQUENCE.
  6. "Functional variation in a disease resistance gene in populations of Arabidopsis thaliana."
    Jorgensen T.H., Emerson B.C.
    Mol. Ecol. 17:4912-4923(2008)
    Cited for: NUCLEOTIDE SEQUENCE.
  7. TAIR
    Swarbreck D., Lamesch P., Wilks C., Huala E.
    Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  8. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. ColumbiaImported.

Entry informationi

Entry nameiQ9SCS6_ARATH
AccessioniPrimary (citable) accession number: Q9SCS6
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: October 29, 2014
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3