Q9SAU2 (Q9SAU2_ARATH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
D-ribulose-5-phosphate-3-epimerase EMBL AED97463.1

Submitted name:
Putative ribulose-5-phosphate-3-epimerase EMBL AAK76529.1
Submitted name:
Ribulose-5-phosphate-3-epimerase EMBL AAD09954.1
EC=5.1.3.1 EMBL AAD09954.1

Gene names

Name:	RPE EMBL AED97463.1
Ordered Locus Names:	At5g61410 TAIR At5g61410
ORF Names:	AT5G61410 EMBL AED97463.1

Organism

Arabidopsis thaliana (Mouse-ear cress) EMBL AAD09954.1

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	281 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Molecular function	Isomerase EMBL AAD09954.1
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro response to cold Inferred from expression pattern. Source: TAIR response to nematode Inferred from mutant phenotype Ref.2. Source: TAIR
Cellular component	apoplast Inferred from direct assay. Source: TAIR chloroplast envelope Inferred from direct assay. Source: TAIR chloroplast stroma Inferred from direct assay. Source: TAIR stromule Inferred from direct assay. Source: TAIR thylakoid Inferred from direct assay. Source: TAIR
Molecular function	ribulose-phosphate 3-epimerase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9SAU2 [UniParc]. Last modified May 1, 2000. Version 1. Checksum: 0F4FEE6549F6FE70	FASTA	281	30,009
	10 20 30 40 50 60 MSTSAASLCC SSTQVNGFGL RPERSLLYQP TSFSFSRRRT HGIVKASSRV DRFSKSDIIV 70 80 90 100 110 120 SPSILSANFA KLGEQVKAVE LAGCDWIHVD VMDGRFVPNI TIGPLVVDAL RPVTDLPLDV 130 140 150 160 170 180 HLMIVEPEQR VPDFIKAGAD IVSVHCEQQS TIHLHRTVNQ IKSLGAKAGV VLNPGTPLSA 190 200 210 220 230 240 IEYVLDMVDL VLIMSVNPGF GGQSFIESQV KKISDLRKMC AEKGVNPWIE VDGGVTPANA 250 260 270 280 YKVIEAGANA LVAGSAVFGA KDYAEAIKGI KASKRPAAVA V

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Structural analysis of Arabidopsis thaliana chromosome 5. IV. Sequence features of the regions of 1,456,315 bp covered by nineteen physically assigned P1 and TAC clones." Sato S., Kaneko T., Kotani H., Nakamura Y., Asamizu E., Miyajima N., Tabata S. DNA Res. 5:41-54(1998) [PubMed: 9628582] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	"RPE, a plant gene involved in early developmental steps of nematode feeding cells." Favery B., Lecomte P., Gil N., Bechtold N., Bouchez D., Dalmasso A., Abad P. EMBO J. 17:6799-6811(1998) [PubMed: 9843485] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[3]	"Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana." Kazusa DNA Research Institute, Cold Spring Harbor and Washington University in St Louis Sequencing Consortium, European Union Arabidopsis Genome Sequencing Consortium Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E., Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K. , Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D., Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A., Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I., Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T., Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A., McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U., Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G., Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W., Bevan M., Fransz P.F. Nature 408:823-826(2000) [PubMed: 11130714] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[4]	"Arabidopsis Full Length cDNA Clones." Yamada K., Liu S.X., Sakano H., Pham P.K., Banh J., Chung M.K., Goldsmith A.D., Lee J.M., Quach H.L., Toriumi M., Yu G., Bowser L., Carninci P., Chen H., Cheuk R., Hayashizaki Y., Ishida J., Jones T. , Kamiya A., Karlin-Neumann G., Kawai J., Kim C., Lam B., Lin J., Miranda M., Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Shinozaki K., Davis R.W., Ecker J.R., Theologis A. Submitted (JUL-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[5]	"Arabidopsis Open Reading Frame (ORF) Clones." Yamada K., Banh J., Chan M.M., Chang C.H., Chang E., Dale J.M., Deng J.M., Goldsmith A.D., Lee J.M., Onodera C.S., Quach H.L., Tang C., Toriumi M., Wu H.C., Yamamura Y., Yu G., Bowser L., Carninci P. , Chen H., Cheuk R., Hayashizaki Y., Ishida J., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Kim C., Lam B., Lin J., Meyers M.C., Miranda M., Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Shinozaki K., Davis R.W., Ecker J.R., Theologis A. Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[6]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AF015274 mRNA. Translation: AAD09954.1. AY045855 mRNA. Translation: AAK76529.1. AY091381 mRNA. Translation: AAM14320.1. CP002688 Genomic DNA. Translation: AED97463.1. CP002688 Genomic DNA. Translation: AED97464.1. AB010073 Genomic DNA. Translation: BAB08496.1.
IPI	IPI00546385.
RefSeq	NP_200949.1. NM_125534.3. NP_851240.1. NM_180909.2.
UniGene	At.25118. At.70668.
3D structure databases
HSSP	HSSP built from PDB template 1RPX based on UniProtKB Q43843.
ProteinModelPortal	Q9SAU2.
SMR	Q9SAU2. Positions 48-276.
ModBase	Search...
Protein-protein interaction databases
IntAct	Q9SAU2. 2 interactions.
STRING	Q9SAU2.
Proteomic databases
PRIDE	Q9SAU2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	AT5G61410.1; AT5G61410.1; AT5G61410. AT5G61410.2; AT5G61410.2; AT5G61410.
GeneID	836262.
KEGG	ath:AT5G61410.
NMPDR	fig|3702.1.peg.28162.
Organism-specific databases
TAIR	At5g61410.
Phylogenomic databases
eggNOG	KOG3111.
GeneTree	EPGT00070000030875.
HOGENOM	HBG571751.
InParanoid	Q9SAU2.
OMA	APADPYL.
PhylomeDB	Q9SAU2.
ProtClustDB	PLN02334.
Gene expression databases
ArrayExpress	Q9SAU2.
Genevestigator	Q9SAU2.
Family and domain databases
InterPro	IPR013785. Aldolase_TIM. IPR000056. Ribul_P_3_epim. IPR011060. RibuloseP-bd_barrel. [Graphical view]
Gene3D	G3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KO	K01783.
PANTHER	PTHR11749. Ribul_P_3_epim. 1 hit.
Pfam	PF00834. Ribul_P_3_epim. 1 hit. [Graphical view]
SUPFAM	SSF51366. RibP_bind_barrel. 1 hit.
TIGRFAMs	TIGR01163. Rpe. 1 hit.
PROSITE	PS01085. RIBUL_P_3_EPIMER_1. 1 hit. PS01086. RIBUL_P_3_EPIMER_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9SAU2_ARATH

Accession

Primary (citable) accession number: Q9SAU2

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	May 1, 2000
Last modified:	January 25, 2012
This is version 80 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)