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Q9SAU2 (Q9SAU2_ARATH) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 80. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Putative ribulose-5-phosphate-3-epimerase EMBL AAK76529.1

Ribulose-5-phosphate-3-epimerase EMBL AAD09954.1
EC=5.1.3.1 EMBL AAD09954.1
Gene names
Name:RPE EMBL AED97463.1
Ordered Locus Names:At5g61410 TAIR At5g61410
ORF Names:AT5G61410 EMBL AED97463.1
OrganismArabidopsis thaliana (Mouse-ear cress) EMBL AAD09954.1
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsrosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length281 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q9SAU2 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 0F4FEE6549F6FE70

FASTA28130,009
        10         20         30         40         50         60 
MSTSAASLCC SSTQVNGFGL RPERSLLYQP TSFSFSRRRT HGIVKASSRV DRFSKSDIIV 

        70         80         90        100        110        120 
SPSILSANFA KLGEQVKAVE LAGCDWIHVD VMDGRFVPNI TIGPLVVDAL RPVTDLPLDV 

       130        140        150        160        170        180 
HLMIVEPEQR VPDFIKAGAD IVSVHCEQQS TIHLHRTVNQ IKSLGAKAGV VLNPGTPLSA 

       190        200        210        220        230        240 
IEYVLDMVDL VLIMSVNPGF GGQSFIESQV KKISDLRKMC AEKGVNPWIE VDGGVTPANA 

       250        260        270        280 
YKVIEAGANA LVAGSAVFGA KDYAEAIKGI KASKRPAAVA V 

« Hide

References

« Hide 'large scale' references
[1]"Structural analysis of Arabidopsis thaliana chromosome 5. IV. Sequence features of the regions of 1,456,315 bp covered by nineteen physically assigned P1 and TAC clones."
Sato S., Kaneko T., Kotani H., Nakamura Y., Asamizu E., Miyajima N., Tabata S.
DNA Res. 5:41-54(1998) [PubMed: 9628582] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]"RPE, a plant gene involved in early developmental steps of nematode feeding cells."
Favery B., Lecomte P., Gil N., Bechtold N., Bouchez D., Dalmasso A., Abad P.
EMBO J. 17:6799-6811(1998) [PubMed: 9843485] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[3]"Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana."
Kazusa DNA Research Institute, Cold Spring Harbor and Washington University in St Louis Sequencing Consortium, European Union Arabidopsis Genome Sequencing Consortium
Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E., Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K. expand/collapse author list , Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D., Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A., Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I., Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T., Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A., McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U., Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G., Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W., Bevan M., Fransz P.F.
Nature 408:823-826(2000) [PubMed: 11130714] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[4]"Arabidopsis Full Length cDNA Clones."
Yamada K., Liu S.X., Sakano H., Pham P.K., Banh J., Chung M.K., Goldsmith A.D., Lee J.M., Quach H.L., Toriumi M., Yu G., Bowser L., Carninci P., Chen H., Cheuk R., Hayashizaki Y., Ishida J., Jones T. expand/collapse author list , Kamiya A., Karlin-Neumann G., Kawai J., Kim C., Lam B., Lin J., Miranda M., Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Shinozaki K., Davis R.W., Ecker J.R., Theologis A.
Submitted (JUL-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[5]"Arabidopsis Open Reading Frame (ORF) Clones."
Yamada K., Banh J., Chan M.M., Chang C.H., Chang E., Dale J.M., Deng J.M., Goldsmith A.D., Lee J.M., Onodera C.S., Quach H.L., Tang C., Toriumi M., Wu H.C., Yamamura Y., Yu G., Bowser L., Carninci P. expand/collapse author list , Chen H., Cheuk R., Hayashizaki Y., Ishida J., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Kim C., Lam B., Lin J., Meyers M.C., Miranda M., Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Shinozaki K., Davis R.W., Ecker J.R., Theologis A.
Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[6]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF015274 mRNA. Translation: AAD09954.1.
AY045855 mRNA. Translation: AAK76529.1.
AY091381 mRNA. Translation: AAM14320.1.
CP002688 Genomic DNA. Translation: AED97463.1.
CP002688 Genomic DNA. Translation: AED97464.1.
AB010073 Genomic DNA. Translation: BAB08496.1.
IPIIPI00546385.
RefSeqNP_200949.1. NM_125534.3.
NP_851240.1. NM_180909.2.
UniGeneAt.25118.
At.70668.

3D structure databases

HSSPHSSP built from PDB template 1RPX based on UniProtKB Q43843.
ProteinModelPortalQ9SAU2.
SMRQ9SAU2. Positions 48-276.
ModBaseSearch...

Protein-protein interaction databases

IntActQ9SAU2. 2 interactions.
STRINGQ9SAU2.

Proteomic databases

PRIDEQ9SAU2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT5G61410.1; AT5G61410.1; AT5G61410.
AT5G61410.2; AT5G61410.2; AT5G61410.
GeneID836262.
KEGGath:AT5G61410.
NMPDRfig|3702.1.peg.28162.

Organism-specific databases

TAIRAt5g61410.

Phylogenomic databases

eggNOGKOG3111.
GeneTreeEPGT00070000030875.
HOGENOMHBG571751.
InParanoidQ9SAU2.
OMAAPADPYL.
PhylomeDBQ9SAU2.
ProtClustDBPLN02334.

Gene expression databases

ArrayExpressQ9SAU2.
GenevestigatorQ9SAU2.

Family and domain databases

InterProIPR013785. Aldolase_TIM.
IPR000056. Ribul_P_3_epim.
IPR011060. RibuloseP-bd_barrel.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK01783.
PANTHERPTHR11749. Ribul_P_3_epim. 1 hit.
PfamPF00834. Ribul_P_3_epim. 1 hit.
[Graphical view]
SUPFAMSSF51366. RibP_bind_barrel. 1 hit.
TIGRFAMsTIGR01163. Rpe. 1 hit.
PROSITEPS01085. RIBUL_P_3_EPIMER_1. 1 hit.
PS01086. RIBUL_P_3_EPIMER_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9SAU2_ARATH
AccessionPrimary (citable) accession number: Q9SAU2
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: January 25, 2012
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)