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Protein
Submitted name:

At1g80930/F23A5_23

Gene

F23A5.29

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
At1g80930/F23A5_23Imported
Submitted name:
F23A5.29 proteinImported
Submitted name:
MIF4G and MA3 domain-containing proteinImported
Gene namesi
Name:F23A5.29Imported
Ordered Locus Names:At1g80930Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

TAIRiAT1G80930.

Subcellular locationi

GO - Cellular componenti

  • catalytic step 2 spliceosome Source: GO_Central
  • cytosol Source: TAIR
  • nucleus Source: TAIR
  • U2-type catalytic step 1 spliceosome Source: GO_Central
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi3702.AT1G80930.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini649 – 765117MIInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG2140. Eukaryota.
ENOG410XNP2. LUCA.
HOGENOMiHOG000212368.
KOiK13100.
OMAiDVEPNKS.

Family and domain databases

Gene3Di1.25.40.180. 1 hit.
InterProiIPR016024. ARM-type_fold.
IPR003891. Initiation_fac_eIF4g_MI.
IPR016021. MIF4-like.
IPR003890. MIF4G-like_typ-3.
[Graphical view]
PfamiPF02847. MA3. 1 hit.
[Graphical view]
SMARTiSM00544. MA3. 1 hit.
SM00543. MIF4G. 1 hit.
[Graphical view]
SUPFAMiSSF48371. SSF48371. 1 hit.
PROSITEiPS51366. MI. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9SAG7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRHGSSSDE EERVRRRDRR RRERSPDVRR SRTETDDVAR RVRVSDDEDR
60 70 80 90 100
KSSRRDLEIG GTVADGEGRR GDKVRRKETS DDEELARRSR KDRKEANSGS
110 120 130 140 150
EDDRGKRIEV DSDGDGERRV NKGRNTDRVR ADTSSDEEDD LKGNKKEPME
160 170 180 190 200
VDDDYGRRGR RRSPKVMEKQ GRERSHRGSR VIADKPSDEE DDRQRSRGGR
210 220 230 240 250
RESQRKRRDH RASDDDEEGE IRSERRGKEK NDRGSEGLLK RDRRERDLTD
260 270 280 290 300
GHENGSRRRE SERKDRSRRD DGVRDEKERR HNDKYDDSQR DKLRKEDSRK
310 320 330 340 350
REEKKIEVPK PKLAELNPSE NNAMALGKTG GVYIPPFKLA RMMKEVEDKS
360 370 380 390 400
SVEYQRLTWD ALRKSINGLV NKVNASNIKN IIPELFAENL IRGRGLFCRS
410 420 430 440 450
CMKSQMASPG FTDVFAALVA VINAKFPEVA ELLLKRVVLQ LKRAYKRNDK
460 470 480 490 500
PQLLAAVKFI AHLVNQQVAE EIIALELVTI LLGDPTDDSV EVAVGFVTEC
510 520 530 540 550
GAMLQDVSPR GLNGIFERFR GILHEGEIDK RVQYLIESLF ATRKAKFQGH
560 570 580 590 600
PAVRPELDLV EEKYSHDLSL DHEIDPETAL DIFKPDPDFV ENEKKYEALK
610 620 630 640 650
KELLGDEESE DEDGSDASSE DNDEEEDESD EEDEEQMRIR DETETNLVNL
660 670 680 690 700
RRTIYLTIMS SVDFEEAGHK LLKIKLEPGQ EMELCIMLLE CCSQERTYLR
710 720 730 740 750
YYGLLGQRFC MINKIHQENF EKCFVQQYSM IHRLETNKLR NVAKFFAHLL
760 770 780 790 800
GTDALPWHVL AYIRLTEEDT TSSSRIFIKI LFQELSEHLG IRLLNERLQD
810 820 830 840 850
PTMQESLESI FPKDNPKNTR FAINFFTSIG LGGITENLRE YLKNMPSLIM
860 870 880 890 900
QRQKQVAESE SGSSSGSDSS DSESESESGS SSSSSSDESD REKRKRRRRS
Length:900
Mass (Da):104,017
Last modified:May 1, 2000 - v1
Checksum:i670E2C6CC39A17D9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC011713 Genomic DNA. Translation: AAF14681.1.
AY139757 mRNA. Translation: AAM98078.1.
BT004547 mRNA. Translation: AAO42793.1.
CP002684 Genomic DNA. Translation: AEE36468.1.
PIRiC96842.
RefSeqiNP_178208.1. NM_106741.2.
UniGeneiAt.43915.

Genome annotation databases

EnsemblPlantsiAT1G80930.1; AT1G80930.1; AT1G80930.
GeneIDi844433.
GrameneiAT1G80930.1; AT1G80930.1; AT1G80930.
KEGGiath:AT1G80930.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC011713 Genomic DNA. Translation: AAF14681.1.
AY139757 mRNA. Translation: AAM98078.1.
BT004547 mRNA. Translation: AAO42793.1.
CP002684 Genomic DNA. Translation: AEE36468.1.
PIRiC96842.
RefSeqiNP_178208.1. NM_106741.2.
UniGeneiAt.43915.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT1G80930.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G80930.1; AT1G80930.1; AT1G80930.
GeneIDi844433.
GrameneiAT1G80930.1; AT1G80930.1; AT1G80930.
KEGGiath:AT1G80930.

Organism-specific databases

TAIRiAT1G80930.

Phylogenomic databases

eggNOGiKOG2140. Eukaryota.
ENOG410XNP2. LUCA.
HOGENOMiHOG000212368.
KOiK13100.
OMAiDVEPNKS.

Family and domain databases

Gene3Di1.25.40.180. 1 hit.
InterProiIPR016024. ARM-type_fold.
IPR003891. Initiation_fac_eIF4g_MI.
IPR016021. MIF4-like.
IPR003890. MIF4G-like_typ-3.
[Graphical view]
PfamiPF02847. MA3. 1 hit.
[Graphical view]
SMARTiSM00544. MA3. 1 hit.
SM00543. MIF4G. 1 hit.
[Graphical view]
SUPFAMiSSF48371. SSF48371. 1 hit.
PROSITEiPS51366. MI. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE.
  2. Theologis
    Submitted (DEC-1999) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  3. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
    Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
    , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
    Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. ColumbiaImported.
  4. Cited for: NUCLEOTIDE SEQUENCE.
  5. Cited for: NUCLEOTIDE SEQUENCE.
  6. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  7. "Phosphoproteomic analysis of nuclei-enriched fractions from Arabidopsis thaliana."
    Jones A.M., MacLean D., Studholme D.J., Serna-Sanz A., Andreasson E., Rathjen J.P., Peck S.C.
    J. Proteomics 72:439-451(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  8. "Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks."
    Reiland S., Messerli G., Baerenfaller K., Gerrits B., Endler A., Grossmann J., Gruissem W., Baginsky S.
    Plant Physiol. 150:889-903(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  9. TAIR
    Swarbreck D., Lamesch P., Wilks C., Huala E.
    Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  10. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. ColumbiaImported.

Entry informationi

Entry nameiQ9SAG7_ARATH
AccessioniPrimary (citable) accession number: Q9SAG7
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: July 6, 2016
This is version 110 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.