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Protein

14-3-3-like protein GF14 omicron

Gene

GRF11

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Is associated with a DNA binding complex that binds to the G box, a well-characterized cis-acting DNA regulatory element found in plant genes.By similarity

GO - Molecular functioni

  • ATPase binding Source: TAIR
Complete GO annotation...

Enzyme and pathway databases

ReactomeiR-ATH-3371453. Regulation of HSF1-mediated heat shock response.
R-ATH-3371511. HSF1 activation.

Names & Taxonomyi

Protein namesi
Recommended name:
14-3-3-like protein GF14 omicron
Alternative name(s):
General regulatory factor 11
Gene namesi
Name:GRF11
Ordered Locus Names:At1g34760
ORF Names:F21H2.3
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

TAIRiAT1G34760.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 25225214-3-3-like protein GF14 omicronPRO_0000058673Add
BLAST

Proteomic databases

PaxDbiQ9S9Z8.
PRIDEiQ9S9Z8.

PTM databases

iPTMnetiQ9S9Z8.

Expressioni

Gene expression databases

GenevisibleiQ9S9Z8. AT.

Interactioni

GO - Molecular functioni

  • ATPase binding Source: TAIR

Protein-protein interaction databases

BioGridi25612. 2 interactions.
IntActiQ9S9Z8. 1 interaction.
STRINGi3702.AT1G34760.1.

Structurei

3D structure databases

ProteinModelPortaliQ9S9Z8.
SMRiQ9S9Z8. Positions 4-233.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the 14-3-3 family.Curated

Phylogenomic databases

eggNOGiKOG0841. Eukaryota.
COG5040. LUCA.
HOGENOMiHOG000240379.
InParanoidiQ9S9Z8.
OMAiNEQAERY.

Family and domain databases

InterProiIPR000308. 14-3-3.
IPR023409. 14-3-3_CS.
IPR023410. 14-3-3_domain.
[Graphical view]
PANTHERiPTHR18860. PTHR18860. 1 hit.
PfamiPF00244. 14-3-3. 1 hit.
[Graphical view]
PIRSFiPIRSF000868. 14-3-3. 1 hit.
PRINTSiPR00305. 1433ZETA.
SMARTiSM00101. 14_3_3. 1 hit.
[Graphical view]
SUPFAMiSSF48445. SSF48445. 1 hit.
PROSITEiPS00796. 1433_1. 1 hit.
PS00797. 1433_2. 1 hit.
[Graphical view]

Sequences (3)i

Sequence statusi: Complete.

This entry describes 3 isoformsi produced by alternative splicing. AlignAdd to basket

Note: A number of isoforms are produced. According to EST sequences.

Isoform 1 (identifier: Q9S9Z8-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MENERAKQVY LAKLNEQAER YDEMVEAMKK VAALDVELTI EERNLLSVGY
60 70 80 90 100
KNVIGARRAS WRILSSIEQK EESKGNEQNA KRIKDYRTKV EEELSKICYD
110 120 130 140 150
ILAVIDKHLV PFATSGESTV FYYKMKGDYF RYLAEFKSGA DREEAADLSL
160 170 180 190 200
KAYEAATSSA STELSTTHPI RLGLALNFSV FYYEILNSPE RACHLAKRAF
210 220 230 240 250
DEAIAELDSL NEDSYKDSTL IMQLLRDNLT LWTSDLEEGG EQSKGHNQQD

EN
Length:252
Mass (Da):28,781
Last modified:November 16, 2011 - v2
Checksum:i852335FF39915461
GO
Isoform 2 (identifier: Q9S9Z8-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     241-241: E → K
     242-252: Missing.

Show »
Length:241
Mass (Da):27,514
Checksum:i82376B77F0800B42
GO
Isoform 3 (identifier: Q9S9Z8-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     252-252: N → VNKI

Show »
Length:255
Mass (Da):29,122
Checksum:iA292AF03A335FF39
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti128 – 1281D → G in BAF02188 (Ref. 4) Curated

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei241 – 2411E → K in isoform 2. 1 PublicationVSP_042043
Alternative sequencei242 – 25211Missing in isoform 2. 1 PublicationVSP_042044Add
BLAST
Alternative sequencei252 – 2521N → VNKI in isoform 3. 1 PublicationVSP_042045

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF323920 mRNA. Translation: AAG47840.1.
AC007894 Genomic DNA. Translation: AAD46005.1.
CP002684 Genomic DNA. Translation: AEE31735.1.
CP002684 Genomic DNA. Translation: AEE31736.1.
AK230390 mRNA. Translation: BAF02188.1.
BT029457 mRNA. Translation: ABK59686.1.
RefSeqiNP_001077649.1. NM_001084180.1. [Q9S9Z8-1]
NP_564451.2. NM_103196.3. [Q9S9Z8-3]
UniGeneiAt.11487.

Genome annotation databases

EnsemblPlantsiAT1G34760.2; AT1G34760.2; AT1G34760. [Q9S9Z8-1]
GeneIDi840380.
KEGGiath:AT1G34760.

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF323920 mRNA. Translation: AAG47840.1.
AC007894 Genomic DNA. Translation: AAD46005.1.
CP002684 Genomic DNA. Translation: AEE31735.1.
CP002684 Genomic DNA. Translation: AEE31736.1.
AK230390 mRNA. Translation: BAF02188.1.
BT029457 mRNA. Translation: ABK59686.1.
RefSeqiNP_001077649.1. NM_001084180.1. [Q9S9Z8-1]
NP_564451.2. NM_103196.3. [Q9S9Z8-3]
UniGeneiAt.11487.

3D structure databases

ProteinModelPortaliQ9S9Z8.
SMRiQ9S9Z8. Positions 4-233.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi25612. 2 interactions.
IntActiQ9S9Z8. 1 interaction.
STRINGi3702.AT1G34760.1.

PTM databases

iPTMnetiQ9S9Z8.

Proteomic databases

PaxDbiQ9S9Z8.
PRIDEiQ9S9Z8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G34760.2; AT1G34760.2; AT1G34760. [Q9S9Z8-1]
GeneIDi840380.
KEGGiath:AT1G34760.

Organism-specific databases

TAIRiAT1G34760.

Phylogenomic databases

eggNOGiKOG0841. Eukaryota.
COG5040. LUCA.
HOGENOMiHOG000240379.
InParanoidiQ9S9Z8.
OMAiNEQAERY.

Enzyme and pathway databases

ReactomeiR-ATH-3371453. Regulation of HSF1-mediated heat shock response.
R-ATH-3371511. HSF1 activation.

Miscellaneous databases

PROiQ9S9Z8.

Gene expression databases

GenevisibleiQ9S9Z8. AT.

Family and domain databases

InterProiIPR000308. 14-3-3.
IPR023409. 14-3-3_CS.
IPR023410. 14-3-3_domain.
[Graphical view]
PANTHERiPTHR18860. PTHR18860. 1 hit.
PfamiPF00244. 14-3-3. 1 hit.
[Graphical view]
PIRSFiPIRSF000868. 14-3-3. 1 hit.
PRINTSiPR00305. 1433ZETA.
SMARTiSM00101. 14_3_3. 1 hit.
[Graphical view]
SUPFAMiSSF48445. SSF48445. 1 hit.
PROSITEiPS00796. 1433_1. 1 hit.
PS00797. 1433_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Novel 14-3-3 isoforms in Arabidopsis thaliana."
    Alsterfjord M., Rosenquist M., Larsson C., Sommarin M.
    Submitted (NOV-2000) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2).
    Tissue: Leaf.
  2. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
    Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
    , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
    Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  3. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  4. "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs."
    Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.
    , Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y., Shinozaki K.
    Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
    Strain: cv. Columbia.
  5. "Arabidopsis ORF Clones."
    Bautista V.R., Kim C.J., Chen H., Quinitio C., Ecker J.R.
    Submitted (NOV-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3).
    Strain: cv. Columbia.

Entry informationi

Entry namei14311_ARATH
AccessioniPrimary (citable) accession number: Q9S9Z8
Secondary accession number(s): A0JQ87, F4HWN0, Q0WL19
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 5, 2001
Last sequence update: November 16, 2011
Last modified: January 20, 2016
This is version 93 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.