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Q9S9L9 (Q9S9L9_ARATH) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Serinc-domain containing protein EMBL AEE29416.1
Submitted name:
T24D18.26 protein EMBL AAF18512.1
Gene names
Name:T24D18.26 EMBL AAF18512.1
Ordered Locus Names:At1g16180 TAIR At1g16180
ORF Names:AT1G16180 EMBL AEE29416.1
OrganismArabidopsis thaliana (Mouse-ear cress) [Reference proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length412 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentmembrane

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9S9L9 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 451CF4A8D652036C

FASTA41245,955
        10         20         30         40         50         60 
MFAASCLASC CAACACDACR TVVSGISRRS ARIAYCGLFA LSLIVSWILR EVAAPLMEKL 

        70         80         90        100        110        120 
PWINHFHKTP DREWFETDAV LRVSLGNFLF FSILSVMMIG VKNQKDPRDG IHHGGWMMKI 

       130        140        150        160        170        180 
ICWCILVIFM FFLPNEIISF YESMSKFGAG FFLLVQVVLL LDFVHGWNDT WVGYDEQFWY 

       190        200        210        220        230        240 
AALLVVSLVC YLATFVFSGF LFHWFTPSGH DCGLNTFFII MTLIFVFVFA IVVLHPTVGG 

       250        260        270        280        290        300 
SILPASVISL YCMYLCYSGL ASEPRDYECN GLHNHSKAVS TGTMTIGLLT TVLSVVYSAV 

       310        320        330        340        350        360 
RAGSSTTLLS PPDSPRAEKP LLPIDGKAEE KEEKENKKPV SYSYAFFHII FSLASMYSAM 

       370        380        390        400        410 
LLTGWSTSVG ESGKLVDVGW PSVWVRVVTS WATAGLFIWS LVAPILFPDR EF

« Hide

References

« Hide 'large scale' references
[1]"The sequence of BAC T24D18 from Arabidopsis thaliana chromosome 1."
Liu S.X., Yu G., Sakano H., Jhaveri A., Lee J.M., Lenz C., Pham P., Toriumi M., Chin C., Chiou J., Choi E., Chung M., Gonzalez A., Howng B., Koo T., Li J., Liu A., Vaysberg M. expand/collapse author list , Altafi H., Brooks S., Buehler E., Chao Q., Conn L., Conway A., Hansen N., Johnson-Hopson C., Khan S., Kim C., Lam B., Nguyen M., Palm C., Shinn P., Tambunga G., Davis R.W., Ecker J.R., Federspiel N.A., Theologis A.
Submitted (NOV-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]Theologis
Submitted (DEC-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K. expand/collapse author list , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[4]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Columbia.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AC010924 Genomic DNA. Translation: AAF18512.1.
CP002684 Genomic DNA. Translation: AEE29416.1.
CP002684 Genomic DNA. Translation: AEE29417.1.
IPIIPI00542885.
PIRF86296.
RefSeqNP_001185008.1. NM_001198079.1.
NP_173069.1. NM_101485.3.
UniGeneAt.11862.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING3702.AT1G16180.1-P.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT1G16180.1; AT1G16180.1; AT1G16180.
AT1G16180.2; AT1G16180.2; AT1G16180.
GeneID838187.
KEGGath:AT1G16180.

Organism-specific databases

TAIRAt1g16180.

Phylogenomic databases

eggNOGNOG308011.
HOGENOMHOG000165463.
InParanoidQ9S9L9.
OMASEPRDYE.
ProtClustDBCLSN2679769.

Gene expression databases

GenevestigatorQ9S9L9.

Family and domain databases

InterProIPR005016. TMS_TDE.
[Graphical view]
PANTHERPTHR10383. PTHR10383. 1 hit.
PfamPF03348. Serinc. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9S9L9_ARATH
AccessionPrimary (citable) accession number: Q9S9L9
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: May 1, 2013
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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