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Protein
Submitted name:

Limit dextrinase

Gene
N/A
Organism
Hordeum vulgare (Barley)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi374Calcium 1Combined sources1
Metal bindingi425Calcium 2; via carbonyl oxygenCombined sources1
Metal bindingi428Calcium 2Combined sources1
Metal bindingi430Calcium 2; via carbonyl oxygenCombined sources1
Metal bindingi470Calcium 1; via carbonyl oxygenCombined sources1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidaseImported, Hydrolase
LigandCalciumCombined sources, Metal-bindingCombined sources

Enzyme and pathway databases

BRENDAi3.2.1.142. 2687.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Limit dextrinaseImported (EC:3.2.1.41Imported)
OrganismiHordeum vulgare (Barley)Imported
Taxonomic identifieri4513 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladePooideaeTriticodaeTriticeaeHordeinaeHordeum

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2Y4SX-ray2.10A79-561[»]
A563-962[»]
SMRiQ9S7S8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini206 – 290CBM_48InterPro annotationAdd BLAST85
Domaini790 – 960DUF3372InterPro annotationAdd BLAST171

Phylogenomic databases

eggNOGiENOG410IN7N. Eukaryota.
COG1523. LUCA.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
InterProiView protein in InterPro
IPR004193. Glyco_hydro_13_N.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR011839. Pullul_strch.
IPR024561. Pullul_strch_C.
PfamiView protein in Pfam
PF02922. CBM_48. 1 hit.
PF11852. DUF3372. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsiTIGR02103. pullul_strch. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9S7S8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPMPMRTMLL RHLSPPSAVP NPRRSSVSSP QRIPVRARPP PLHSARATAL
60 70 80 90 100
RARRRTPMAV GETGASVSAA EAEAEATQAF MPDARAYWVT SDLIAWNVGE
110 120 130 140 150
LEAQSVCLYA SRAAAMSLSP SNGGIQGYDS KVELQPESAG LPETVTQKFP
160 170 180 190 200
FISSYRAFRV PSSVDVASLV KCQLVVASFG ADGKHVDVTG LQLPGVLDDM
210 220 230 240 250
FAYTGPLGAV FSEDSVSLHL WAPTAQGVSV CFFDGPAGPA LETVQLKESN
260 270 280 290 300
GVWSVTGPRE WENRYYLYEV DVYHPTKAQV LKCLAGDPYA RGLSANGART
310 320 330 340 350
WLVDINNETL KPASWDELAD EKPKLDSFSD ITIYELHIRD FSAHDGTVDS
360 370 380 390 400
DSRGAFRAFA YQASAGMEHL RKLSDAGLTH VHLLPSFHFA GVDDIKSNWK
410 420 430 440 450
FVDECELATF PPGSDMQQAA VVAIQEEDPY NWGYNPVLWG VPKGSYASDP
460 470 480 490 500
DGPSRIIEYR QMVQALNRIG LRVVMDVVYN HLDSSGPCGI SSVLDKIVPG
510 520 530 540 550
YYVRRDTNGQ IENSAAMNNT ASEHFMVDRL IVDDLLNWAV NYKVDGFRFD
560 570 580 590 600
LMGHIMKRTM MRAKSALQSL TTDAHGVDGS KIYLYGEGWD FAEVARNQRG
610 620 630 640 650
INGSQLNMSG TGIGSFNDRI RDAINGGNPF GNPLQQGFNT GLFLEPNGFY
660 670 680 690 700
QGNEADTRRS LATYADQIQI GLAGNLRDYV LISHTGEAKK GSEIHTFDGL
710 720 730 740 750
PVGYTASPIE TINYVSAHDN ETLFDVISVK TPMILSVDER CRINHLASSM
760 770 780 790 800
MALSQGIPFF HAGDEILRSK SIDRDSYNSG DWFNKLDFTY ETNNWGVGLP
810 820 830 840 850
PSEKNEDNWP LMKPRLENPS FKPAKGHILA ALDSFVDILK IRYSSPLFRL
860 870 880 890 900
STANDIKQRV RFHNTGPSLV PGVIVMGIED ARGESPEMAQ LDTNFSYVVT
910 920 930 940 950
VFNVCPHEVS MDIPALASMG FELHPVQVNS SDTLVRKSAY ESATCRFTVP
960
GRTVSVFVEP RC
Length:962
Mass (Da):105,753
Last modified:May 1, 2000 - v1
Checksum:i5158386FAED162EE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF122049 mRNA. Translation: AAD34347.1.
AF122050 Genomic DNA. Translation: AAD34348.1.
UniGeneiHv.223.

Similar proteinsi

Entry informationi

Entry nameiQ9S7S8_HORVU
AccessioniPrimary (citable) accession number: Q9S7S8
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: October 25, 2017
This is version 89 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources