Q9S7B3 (Q9S7B3_URTDI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Agglutinin isolectin V EMBL AAD05431.1

Gene names

Name:	chia5.5.2 EMBL AAD05431.1
Synonyms:	chia5.5.1 EMBL AAD05429.1

Organism

Urtica dioica (Great nettle) (Stinging nettle) EMBL AAD05431.1

Taxonomic identifier

3501 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Rosales › Urticaceae › Urtica

Protein attributes

Sequence length	112 AA.
Sequence status	Fragment.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Evidence at protein level

General annotation (Comments)

Sequence similarities

Contains 2 chitin-binding type-1 domains. RuleBase RU000410

Ontologies

Keywords
Domain	Signal EMBL AAD05431.1
Ligand	Chitin-binding SAAS SAAS001002 RuleBase RU000410
PTM	Disulfide bond SAAS SAAS001002
Technical term	3D-structure PDB 1EHH PDB 1EHD
Gene Ontology (GO)
Molecular function	chitin binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 23	23	Potential EMBL AAD05431.1
	Chain	24 – ›112	›89	agglutinin isolectin V EMBL AAD05431.1		PRO_5000054210
Regions
	Region	42 – 47	6	N-acetyl-D-glucosamine binding PDB 1EHH
Sites
	Binding site	53	1	N-acetyl-D-glucosamine PDB 1EHH
Experimental info
	Non-terminal residue	112	1	EMBL AAD05431.1

Sequences

	Sequence		Length	Mass (Da)
	Q9S7B3 [UniParc]. Last modified May 1, 2000. Version 1. Checksum: B37D8529BC67E617	FASTA	112	11,712
	10 20 30 40 50 60 MMMRFLSAVV IMSSAMAVGL VSAQRCGSQG GGGTCPGLRC CSIWGWCGDS EPYCGRTCEN 70 80 90 100 110 KCWSGERSDH RCGAAVGNPP CGQDRCCSVH GWCGGGNDYC SGGNCQYRCS SS

References

[1]	"Characterization of Urtica dioica agglutinin isolectins and the encoding gene family." Does M.P., Ng D.K., Dekker H.L., Peumans W.J., Houterman P.M., Van Damme E.J., Cornelissen B.J. Plant Mol. Biol. 39:335-347(1999) [PubMed: 10080699] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	"Crystal structures of Urtica dioica agglutinin and its complex with tri-N-acetylchitotriose." Harata K., Muraki M. J. Mol. Biol. 297:673-681(2000) [PubMed: 10731420] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.50 ANGSTROMS) OF 25-112 IN COMPLEX WITH N-ACETYL-D-GLUCOSAMINE.
+	Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AF059554 Genomic DNA. Translation: AAD05429.1.
AF059556 Genomic DNA. Translation: AAD05431.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1EHD	X-ray	1.50	A	25-112	[»]
1EHH	X-ray	1.90	A/B	25-112	[»]

ProteinModelPortal

Q9S7B3.

ModBase

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Protocols and materials databases

StructuralBiologyKnowledgebase

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Family and domain databases

InterPro

IPR001002. Chitin-bd_1.
IPR018371. Chitin-binding_1_CS.
[Graphical view]

Gene3D

G3DSA:3.30.60.10. Chitin_bd_1. 2 hits.

Pfam

PF00187. Chitin_bind_1. 2 hits.
[Graphical view]

ProDom

PD000609. Chitin_bd_1. 2 hits.
[Graphical view] [Entries sharing at least one domain]

SMART

SM00270. ChtBD1. 2 hits.
[Graphical view]

SUPFAM

SSF57016. Chitin_bd_1. 2 hits.

PROSITE

PS00026. CHIT_BIND_I_1. 2 hits.
PS50941. CHIT_BIND_I_2. 2 hits.
[Graphical view]

ProtoNet

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Entry information

Entry name

Q9S7B3_URTDI

Accession

Primary (citable) accession number: Q9S7B3

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	May 1, 2000
Last modified:	January 25, 2012
This is version 53 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)