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Reviewed, UniProtKB/Swiss-Prot Q9S744 (CML9_ARATH)

Last modified June 16, 2009. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Binary interactions · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

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Names and origin

Protein namesRecommended name:
    Calmodulin-like protein 9
      Short name=AtCaM-9
Gene names
Name: CML9
Synonyms: CAM9
Ordered Locus Names: At3g51920
ORF Names: F4F15.30
OrganismArabidopsis thaliana (Mouse-ear cress) [Complete proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Arabidopsis

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Protein attributes

Sequence length151 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at protein level.

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General annotation (Comments)

Function

Potential calcium sensor. Ref.1

Tissue specificity

Expressed in leaves, flowers and siliques. Ref.1

Induction

By touch and during darkness conditions. Ref.5

Sequence similarities

Belongs to the calmodulin family.

Contains 4 EF-hand domains.

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Binary interactions

With

Entry

#Exp.

IntAct

Notes

O221791EBI-1236048,EBI-1238013
P274501EBI-1236048,EBI-1238108
Q29Q721EBI-1236048,EBI-1238714
Q2V3592EBI-1236048,EBI-1235819
Q3EAG31EBI-1236048,EBI-1238312
Q3EBV71EBI-1236048,EBI-1235683
Q4PSE31EBI-1236048,EBI-1238507
Q7X9H61EBI-1236048,EBI-1238497
Q7X9N21EBI-1236048,EBI-622264
Q84JC21EBI-1236048,EBI-1238377
Q8H1D61EBI-1236048,EBI-1238166
Q8LPR41EBI-1236048,EBI-1238087
Q8VZ701EBI-1236048,EBI-1238078
Q93Z301EBI-1236048,EBI-1237782
Q949U41EBI-1236048,EBI-1238455
Q9FGF51EBI-1236048,EBI-1238451
Q9FGX21EBI-1236048,EBI-942623
Q9FGZ51EBI-1236048,EBI-622281
Q9FIW61EBI-1236048,EBI-1237967
Q9FL191EBI-1236048,EBI-622440
Q9FLL01EBI-1236048,EBI-1238516
Q9FLV41EBI-1236048,EBI-1238700
Q9FM691EBI-1236048,EBI-1238525
Q9FUD31EBI-1236048,EBI-942633
Q9LJZ21EBI-1236048,EBI-1238426
Q9LUI61EBI-1236048,EBI-1238581
Q9LW661EBI-1236048,EBI-1238066
Q9LX561EBI-1236048,EBI-1235891
Q9SGN71EBI-1236048,EBI-1238190
Q9SJX81EBI-1236048,EBI-1238001
Q9SKN21EBI-1236048,EBI-1237944
Q9SL701EBI-1236048,EBI-1238421
ABF4Q9M7Q21EBI-1236048,EBI-1237867
AFRQ8LAW21EBI-1236048,EBI-604438
AGL15Q388471EBI-1236048,EBI-622076
AGL21Q9SZJ61EBI-1236048,EBI-621986
AGL61Q4PSU41EBI-1236048,EBI-1237976
AGL80Q9FJK31EBI-1236048,EBI-622424
ALDH3F1Q70E961EBI-1236048,EBI-1237774
APK2aO498391EBI-1236048,EBI-1238631
APK2bO498401EBI-1236048,EBI-1238651
ASK6Q390101EBI-1236048,EBI-1238323
At1g08320Q56W431EBI-1236048,EBI-1237844
At1g20950/F9H16.6Q9SYP21EBI-1236048,EBI-1238145
At1g27190O045671EBI-1236048,EBI-1238687
At1g54610Q9ZVM91EBI-1236048,EBI-1235713
At1g58110Q84WC81EBI-1236048,EBI-1237819
At1g60040Q9ZUI91EBI-1236048,EBI-622185
At1g68380/T2E12_7Q9M9C31EBI-1236048,EBI-1238618
At1g77145O806511EBI-1236048,EBI-1238133
At1g80120Q9SSC71EBI-1236048,EBI-1238625
At2g43850Q9SDB31EBI-1236048,EBI-1238366
At3g02880Q9M8T01EBI-1236048,EBI-1238677
At3g04100Q9M8W61EBI-1236048,EBI-1238487
At3g04430Q9M8441EBI-1236048,EBI-1238479
At3g05050Q9MAB41EBI-1236048,EBI-1237895
At3g17600Q2VW981EBI-1236048,EBI-1235997
At3g19100Q9LJL91EBI-1236048,EBI-1238393
AT4g02410O812921EBI-1236048,EBI-1237950
AT4g02640O227631EBI-1236048,EBI-969959
AT4g34380Q9SZ031EBI-1236048,EBI-1238343
At4g37240/C7A10_120Q8LE561EBI-1236048,EBI-1237996
At4g39540/F23K16_170Q8GY881EBI-1236048,EBI-1238334
At5g38800Q9FMC21EBI-1236048,EBI-1237855
At5g49760/K2I5_13Q8GZ991EBI-1236048,EBI-1238218
AtMg00870P925251EBI-1236048,EBI-1238547
BZIP61Q9M2K41EBI-1236048,EBI-1237830
CAM6Q035091EBI-1236048,EBI-1236097
CDKB2-2Q8LG641EBI-1236048,EBI-1235761
CIPK24Q9LDI32EBI-1236048,EBI-537551
CIPK6O655541EBI-1236048,EBI-537615
CKI1Q390501EBI-1236048,EBI-1237881
CML45Q93Z271EBI-1236048,EBI-1235938
CPK10Q9M9V81EBI-1236048,EBI-1238406
CPK3Q424791EBI-1236048,EBI-1235782
CPK30Q9SSF82EBI-1236048,EBI-1235738
CRK40Q9SYS31EBI-1236048,EBI-1238119
CRK9O654691EBI-1236048,EBI-1238158
CYP19-3Q388671EBI-1236048,EBI-1235851
CYP705A20Q9LJY71EBI-1236048,EBI-1237907
CYP78A9Q9SLP11EBI-1236048,EBI-1238437
dl4570wO235521EBI-1236048,EBI-1235805
F11C1_150Q9SND62EBI-1236048,EBI-1235872
F14F8_210Q9LFU31EBI-1236048,EBI-1237805
F18O21_230Q9LYL61EBI-1236048,EBI-1238139
F7H19.240O827541EBI-1236048,EBI-1238561
FBW2Q9ZPE41EBI-1236048,EBI-604740
FBX14Q8RWQ81EBI-1236048,EBI-1235922
HSP81-2P557372EBI-1236048,EBI-1235834
LRR-RLKQ3ECN41EBI-1236048,EBI-1238268
LRR-RLKQ8VYG71EBI-1236048,EBI-1238236
LRR-RLKQ9LSI91EBI-1236048,EBI-1238253
LRR-RLKQ9M9C51EBI-1236048,EBI-1238661
MHKP432941EBI-1236048,EBI-1238022
MPK18Q9C5C01EBI-1236048,EBI-1238534
NEK7Q9LHI71EBI-1236048,EBI-1238055
PCKAQ9T0741EBI-1236048,EBI-1238593
PEPKR2Q8W4901EBI-1236048,EBI-1238381
PFK2Q9FIK01EBI-1236048,EBI-1238609
PFK3Q94AA41EBI-1236048,EBI-1238600
PHE2Q7XJK81EBI-1236048,EBI-622157
psbAP837552EBI-1236048,EBI-1236013
RKF3P930501EBI-1236048,EBI-1238281
SCL21Q9S7H51EBI-1236048,EBI-1238472
SCL23Q9FHZ11EBI-1236048,EBI-1238460
SCL4Q9FL031EBI-1236048,EBI-1238466
SHP1Q5XXJ31EBI-1236048,EBI-1237985
T12C14_120Q9LZP81EBI-1236048,EBI-942845
T20L15_160Q9LZV71EBI-1236048,EBI-1238200
T22P22_10Q9LYG81EBI-1236048,EBI-1238551
T4M14.10Q9LQ651EBI-1236048,EBI-942986
TT16Q8RYD91EBI-1236048,EBI-621993
WAKL21Q8GYF51EBI-1236048,EBI-1238355
WRKY43Q8GY111EBI-1236048,EBI-1235953
WRKY53Q9SUP62EBI-1236048,EBI-1235980

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 151151Calmodulin-like protein 9
PRO_0000073653

Regions

Domain8 – 4336EF-hand 1
Domain44 – 7936EF-hand 2
Domain81 – 11636EF-hand 3
Domain117 – 15135EF-hand 4
Calcium binding94 – 105121 Potential
Calcium binding130 – 141122 Potential

Amino acid modifications

Modified residue1161N6,N6,N6-trimethyllysine By similarity

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Sequences

Sequence LengthMass (Da)Tools
Q9S744-1 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: D6DEF91B10D0E48A

FASTA15117,036
        10         20         30         40         50         60 
MADAFTDEQI QEFYEAFCLI DKDSDGFITK EKLTKVMKSM GKNPKAEQLQ QMMSDVDIFG 

        70         80         90        100        110        120 
NGGITFDDFL YIMAQNTSQE SASDELIEVF RVFDRDGDGL ISQLELGEGM KDMGMKITAE 

       130        140        150 
EAEHMVREAD LDGDGFLSFH EFSKMMIAAS Y

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References

« Hide 'large scale' references
[1]"Characterization of three new members of the Arabidopsis thaliana calmodulin gene family: conserved and highly diverged members of the gene family functionally complement a yeast calmodulin null."
Zielinski R.E.
Planta 214:446-455(2002) [PubMed: 11855649] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, TISSUE SPECIFICITY.
Strain: cv. Columbia.
[2]"Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana."
Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B., Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N., Artiguenave F. expand/collapse author list , Robert C., Brottier P., Wincker P., Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H., Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A., Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H., Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J., Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B., Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D., de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E., Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G., Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X., Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M., Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B., Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J., Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C., Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y., Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K., Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
Nature 408:820-822(2000) [PubMed: 11130713] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[3]"Empirical analysis of transcriptional activity in the Arabidopsis genome."
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. expand/collapse author list , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
Science 302:842-846(2003) [PubMed: 14593172] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Columbia.
[4]"Calmodulins and related potential calcium sensors of Arabidopsis."
McCormack E., Braam J.
New Phytol. 159:585-598(2003)
Cited for: GENE FAMILY, NOMENCLATURE.
[5]"Genome-wide identification of touch- and darkness-regulated Arabidopsis genes: a focus on calmodulin-like and XTH genes."
Lee D., Polisensky D.H., Braam J.
New Phytol. 165:429-444(2005) [PubMed: 15720654] [Abstract]
Cited for: INDUCTION.

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Cross-references

Sequence databases

AF178075 mRNA. Translation: AAD53315.1.
AL049711 Genomic DNA. Translation: CAB41312.1.
AF380635 mRNA. Translation: AAK55716.1.
AY054133 mRNA. Translation: AAL06794.1.
IPIIPI00541193.
PIRT49071.
RefSeqNP_190760.1.
UniGeneAt.24807

3D structure databases

HSSPHSSP built from PDB template 1AK8 based on UniProtKB P62157.
ModBaseSearch...

Protein-protein interaction databases

IntActQ9S744. 115 interactions.

Genome annotation databases

GeneID824355.
GenomeReviewsGene locus AT3G51920 in contig BA000014_GR.
KEGGath:AT3G51920.
NMPDRfig|3702.1.peg.16450.

Organism-specific databases

GeneFarm5186.
TAIRAt3g51920.

Gene expression databases

GermOnlineAT3G51920. Arabidopsis thaliana.

Family and domain databases

InterProIPR011992. EF-Hand_type.
IPR018248. EF_hand.
IPR018247. EF_HAND_1.
IPR018249. EF_HAND_2.
IPR002048. EF_hand_Ca_bd.
[Graphical view]
Gene3DG3DSA:1.10.238.10. EF-Hand_type. 1 hit.
PfamPF00036. efhand. 3 hits.
[Graphical view]
ProDomPD000012. EF-hand. 2 hits.
[Graphical view] [Entries sharing at least one domain]
SMARTSM00054. EFh. 4 hits.
[Graphical view]
PROSITEPS00018. EF_HAND_1. 2 hits.
PS50222. EF_HAND_2. 4 hits.
[Graphical view]
ProtoNetSearch...

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Entry information

Entry nameCML9_ARATH
AccessionPrimary (citable) accession number: Q9S744
Entry history
Integrated into UniProtKB/Swiss-Prot: December 20, 2005
Last sequence update: May 1, 2000
Last modified: June 16, 2009
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectPPAP (Plant Proteome Annotation Project)

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Relevant documents

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Binary interactions · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents