Q9S3L0 (Q9S3L0_CLOSR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alfa-L-rhamnosidase EMBL CAB53341.1
EC=3.2.1.40 EMBL CAB53341.1

Gene names

Name:

ramA EMBL CAB53341.1

Organism

Clostridium stercorarium EMBL CAB53341.1

Taxonomic identifier

1510 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	874 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL CAB53341.1 Hydrolase
Gene Ontology (GO)
Molecular function	alpha-L-rhamnosidase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9S3L0 [UniParc]. Last modified May 1, 2000. Version 1. Checksum: 4741F8622808345C	FASTA	874	100,440
	10 20 30 40 50 60 MMRVYNLKTN RIKNPMGFVI NKPKLSWLVE SDTAKHQVAA QVEISADINF ENIIFDSGKR 70 80 90 100 110 120 TDIDSISYSP QVELKPRTRY YWRVRVWGDD GSEAVSEAAW FETSKMDEPW KAKWITPDFD 130 140 150 160 170 180 PSVHPVVFTD FSIERDVADA RAYVCGLGLY EMSVNGEKTG DEYLAPGLVA YDKWIPYQTY 190 200 210 220 230 240 DITSQLKKGI NTAEFLLGNG WYKGRYGLNR KQPFRYGNEF ALICEIHITY QDGTADVIYT 250 260 270 280 290 300 DTSWKARKSK VIDSGIYDGE IYDDTFCDDA VYPVRIADLD VNKLEPRRSP GIKIKERIKP 310 320 330 340 350 360 AEIIRTPEGE TVIDMGQNMV GWLEFTNRAP KGAEIMLQFG EVLQDGNFYR DNLRTAKCEF 370 380 390 400 410 420 HYISDGKVKK VRPHFTFYGF RYVKLTKWEG EVNPEDFTGL VLYSDLERTG NITTDNSLVN 430 440 450 460 470 480 RLFLNALWSQ KGNFLDVPTD CPQRDERMGW TGDAQVFSGA AAFNMDVFAF FGKYLYDLKQ 490 500 510 520 530 540 EQKARGGNVP VVVPAHDVKQ NGACGWGDAA VIIPWNMYLH YGDVSILEQQ YKSMKGWVDY 550 560 570 580 590 600 IKSKDDAAGG RRLWLNDFHY GDCVSLDVED PFNRFGGTEH AYLASAFYSY SAGIVSKAAK 610 620 630 640 650 660 ILNKKEDAEY YRKLSEEVKN AIRKEYFTPT GRLAVNTQTA YVIALYMDLV PDEWKERVAF 670 680 690 700 710 720 ELRKKLKETK YHLRTGFLGT PYLCRVLSEY GSNDIAYRLL TNTDYPGWLY PVTMGATTIW 730 740 750 760 770 780 ERWNSMLPDG KVSDTGMNSF NHYSYGSIVE WIYRNAAGIQ PVEDAPGFRR FRLKPQPHYL 790 800 810 820 830 840 LKSLDAEFLS PAEKIISRWN INENGSVSFY FRIPFNTTAE LVLPDTEVQD WKEFMSLNVV 850 860 870 NILILTCLKD LTRKCTEQIL QCGKFMKMRG QKKL

References

[1]

"The thermostable alpha-L-rhamnosidase RamA of Clostridium stercorarium: biochemical characterization and primary structure of a bacterial alpha-L-rhamnoside hydrolase, a new type of inverting glycoside hydrolase." Zverlov V.V., Hertel C., Bronnenmeier K., Hroch A., Kellermann J., Schwarz W.H. Mol. Microbiol. 35:173-179(2000) [PubMed: 10632887] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: NCIB 11754 EMBL CAB53341.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AJ238748 Genomic DNA. Translation: CAB53341.1.
3D structure databases
ProteinModelPortal	Q9S3L0.
ModBase	Search...
Protein family/group databases
CAZy	GH78. Glycoside Hydrolase Family 78.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
InterPro	IPR008928. 6-hairpin_glycosidase-like. IPR016007. Alpha_rhamnosid. IPR008902. Bac_rhamnosid. IPR013737. Bac_rhamnosid_N. [Graphical view]
Pfam	PF05592. Bac_rhamnosid. 1 hit. PF08531. Bac_rhamnosid_N. 1 hit. [Graphical view]
PIRSF	PIRSF010631. A-rhamnsds. 1 hit.
SUPFAM	SSF48208. Glyco_trans_6hp. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q9S3L0_CLOSR

Accession

Primary (citable) accession number: Q9S3L0

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	May 1, 2000
Last modified:	October 5, 2010
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)