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Q9S0X0 (Q9S0X0_CLOHI) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 63. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
OrganismClostridium histolyticum EMBL BAA86030.1
Taxonomic identifier1498 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

Protein attributes

Sequence length1118 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region1047 – 10482Chloride binding PDB 1NQJ

Sites

Metal binding10091Calcium 1
Metal binding10111Calcium 1
Metal binding10111Calcium 2
Metal binding10131Calcium 2
Metal binding10141Calcium 2
Metal binding10321Calcium 1; via carbonyl oxygen
Metal binding10371Calcium 1
Metal binding10371Calcium 2
Metal binding10391Calcium 2; via carbonyl oxygen
Metal binding10401Calcium 1
Metal binding10401Calcium 2

Sequences

Sequence LengthMass (Da)Tools
Q9S0X0 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 869F9E4B8DFB3313

FASTA1,118126,257
        10         20         30         40         50         60 
MKKNILKILM DSYSKESKIQ TVRRVTSVSL LAVYLTMNTS SLVLAKPIEN TNDTSIKNVE 

        70         80         90        100        110        120 
KLRNAPNEEN SKKVEDSKND KVEHVKNIEE AKVEQVAPEV KSKSTLRSAS IANTNSEKYD 

       130        140        150        160        170        180 
FEYLNGLSYT ELTNLIKNIK WNQINGLFNY STGSQKFFGD KNRVQAIINA LQESGRTYTA 

       190        200        210        220        230        240 
NDMKGIETFT EVLRAGFYLG YYNDGLSYLN DRNFQDKCIP AMIAIQKNPN FKLGTAVQDE 

       250        260        270        280        290        300 
VITSLGKLIG NASANAEVVN NCVPVLKQFR ENLNQYAPDY VKGTAVNELI KGIEFDFSGA 

       310        320        330        340        350        360 
AYEKDVKTMP WYGKIDPFIN ELKALGLYGN ITSATEWASD VGIYYLSKFG LYSTNRNDIV 

       370        380        390        400        410        420 
QSLEKAVDMY KYGKIAFVAM ERITWDYDGI GSNGKKVDHD KFLDDAEKHY LPKTYTFDNG 

       430        440        450        460        470        480 
TFIIRAGDKV SEEKIKRLYW ASREVKSQFH RVVGNDKALE VGNADDVLTM KIFNSPEEYK 

       490        500        510        520        530        540 
FNTNINGVST DNGGLYIEPR GTFYTYERTP QQSIFSLEEL FRHEYTHYLQ ARYLVDGLWG 

       550        560        570        580        590        600 
QGPFYEKNRL TWFDEGTAEF FAGSTRTSGV LPRKSILGYL AKDKVDHRYS LKKTLNSGYD 

       610        620        630        640        650        660 
DSDWMVYNYG FAVAHYLYEK DMPTFIKMNK AILNTDVKSY DEIIKKLSDD ANKNTDYQTH 

       670        680        690        700        710        720 
IQELADKYQG AGIPLVSDDY LKDHGYKKAS EVYSEISKAA SLTNTSVTAE KSQYFNTFTL 

       730        740        750        760        770        780 
RGTYTGETSK GEFKDWDEMS KKLDGTLESL AKNSWSGYKT LTAYFTNYRV TSDNKVQYDV 

       790        800        810        820        830        840 
VFHGVLTDNA DISNNKAPIA KVTGPSTGAV GRNIEFSGKD SKDEDGKIVS YDWDFVYGAT 

       850        860        870        880        890        900 
SRGKNSVHAY KKAGTYNVTL KVTDDKGATA TESFTIEIKN EDTTTPITKE MEPNDDIKEA 

       910        920        930        940        950        960 
NGPIVEGVTV KGDLNGSDDA DTFYFDVKED GDVTIELPYS GSSNFTWLVY KEGDDQNHIA 

       970        980        990       1000       1010       1020 
SGIDKNNSKV GTFKSTKGRH YVFIYKHDSA SNISYSLNIK GLGNEKLKEK ENNDSSDKAT 

      1030       1040       1050       1060       1070       1080 
VIPNFNTTMQ GSLLGDDSRD YYSFEVKEEG EVNIELDKKD EFGVTWTLHP ESNINDRITY 

      1090       1100       1110 
GQVDGNKVSN KVKLRPGKYY LLVYKYSGSG NYELRVNK 

« Hide

References

[1]"Class2 collagenase."
Hosaka T., Yamato I.
Submitted (APR-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: JCM1403 EMBL BAA86030.1.
[2]"A bacterial collagen-binding domain with novel calcium-binding motif controls domain orientation."
Wilson J.J., Matsushita O., Okabe A., Sakon J.
EMBO J. 22:1743-1752(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.00 ANGSTROMS) OF 1003-1118 IN COMPLEX WITH CALCIUM AND CHLORIDE.
[3]"Induction of stable beta-sheet by Ca2+ in Clostridial collagen binding domain."
Philominathan S.T.L., Wilson J.J., Matsushita O., Sakon J.
Submitted (DEC-2006) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.35 ANGSTROMS) OF 1003-1118 IN COMPLEX WITH CALCIUM.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AB026889 Genomic DNA. Translation: BAA86030.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1NQDX-ray1.65A/B1003-1118[»]
1NQJX-ray1.00A/B1003-1118[»]
2O8OX-ray1.35A/B1003-1118[»]
ProteinModelPortalQ9S0X0.
SMRQ9S0X0. Positions 1005-1118.
ModBaseSearch...
MobiDBSearch...

Chemistry

BindingDBQ9S0X0.

Protein family/group databases

Allergome5989. Clo hi Collagenase.
MEROPSM09.002.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D2.60.40.670. 1 hit.
InterProIPR007280. Peptidase_C_arc/bac.
IPR013661. Peptidase_M9_N_dom.
IPR002169. Peptidase_M9A/M9B.
IPR022409. PKD/Chitinase_dom.
IPR000601. PKD_dom.
[Graphical view]
PfamPF01752. Peptidase_M9. 1 hit.
PF08453. Peptidase_M9_N. 1 hit.
PF00801. PKD. 1 hit.
PF04151. PPC. 1 hit.
[Graphical view]
PRINTSPR00931. MICOLLPTASE.
SMARTSM00089. PKD. 1 hit.
[Graphical view]
SUPFAMSSF49299. SSF49299. 1 hit.
PROSITEPS50093. PKD. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceQ9S0X0.

Entry information

Entry nameQ9S0X0_CLOHI
AccessionPrimary (citable) accession number: Q9S0X0
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: February 19, 2014
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)