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Protein
Submitted name:

Uncharacterized protein

Gene

DR_A0006

Organism
Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciDRAD243230:GH46-2697-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:DR_A0006Imported
OrganismiDeinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)Imported
Taxonomic identifieri243230 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciDeinococcalesDeinococcaceaeDeinococcus
Proteomesi
  • UP000002524 Componenti: Chromosome II

Interactioni

Protein-protein interaction databases

STRINGi243230.DR_A0006.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2KCZNMR-A98-243[»]
3GGNX-ray2.00A/B98-243[»]
ProteinModelPortaliQ9RZE3.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9RZE3.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini108 – 233126Polyketide_cycInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiCOG5637. LUCA.
HOGENOMiHOG000251237.
InParanoidiQ9RZE3.
OMAiMRFKREQ.
OrthoDBiEOG63FW1B.

Family and domain databases

Gene3Di3.30.530.20. 1 hit.
InterProiIPR005031. COQ10_START.
IPR023393. START-like_dom.
[Graphical view]
PfamiPF03364. Polyketide_cyc. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9RZE3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDRRSSPQLR TMTNWNREQP APHAGATGPN SSPGATMQPL ERSLTGAVGA
60 70 80 90 100
ALAAAGLRSR SGLEKVVLTG LGAGLIAVAA RGQNPLATAL KIEQNDEGET
110 120 130 140 150
VVRDAVTIGK PAEQLYAVWR DLPGLPLLMT HLRSVEVLDD KRSRWTVEAP
160 170 180 190 200
APLGTVSWEA ELTADEPGKR IAWRSLPGAR IENSGEVLFR PAPGARGTEV
210 220 230 240 250
VVRLTYRPPG GSAGAVIARM FNQEPSQQLR DDLMRFKREQ ELGHAPTAQG
260
QSSGRAALTP PNKRGDLV
Length:268
Mass (Da):28,636
Last modified:May 1, 2000 - v1
Checksum:i03E1D4681AD789C2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE001825 Genomic DNA. Translation: AAF12292.1.
PIRiB75593.
RefSeqiNP_285330.1. NC_001264.1.
WP_010889266.1. NC_001264.1.

Genome annotation databases

EnsemblBacteriaiAAF12292; AAF12292; DR_A0006.
GeneIDi1798153.
KEGGidra:DR_A0006.
PATRICi21633042. VBIDeiRad64572_2891.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE001825 Genomic DNA. Translation: AAF12292.1.
PIRiB75593.
RefSeqiNP_285330.1. NC_001264.1.
WP_010889266.1. NC_001264.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2KCZNMR-A98-243[»]
3GGNX-ray2.00A/B98-243[»]
ProteinModelPortaliQ9RZE3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi243230.DR_A0006.

Protocols and materials databases

DNASUi1798153.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAF12292; AAF12292; DR_A0006.
GeneIDi1798153.
KEGGidra:DR_A0006.
PATRICi21633042. VBIDeiRad64572_2891.

Phylogenomic databases

eggNOGiCOG5637. LUCA.
HOGENOMiHOG000251237.
InParanoidiQ9RZE3.
OMAiMRFKREQ.
OrthoDBiEOG63FW1B.

Enzyme and pathway databases

BioCyciDRAD243230:GH46-2697-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ9RZE3.

Family and domain databases

Gene3Di3.30.530.20. 1 hit.
InterProiIPR005031. COQ10_START.
IPR023393. START-like_dom.
[Graphical view]
PfamiPF03364. Polyketide_cyc. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422Imported.
  2. "Solution NMR Structure of the C-Terminal Domain of Protein DR_A0006 from Deinococcus radiodurans. Northeast Structural Genomics Consortium Target DrR147D."
    Mills J.L., Ghosh A., Garcia E., Wang H., Ciccosanti C., Xiao R., Nair R., Everett J.K., Swapna G.V.T., Acton T.B., Rost B., Montelione G.T., Szyperski T.
    Submitted (DEC-2008) to the PDB data bank
    Cited for: STRUCTURE BY NMR OF 98-243.
  3. "Crystal structure of DR_A0006 from Deinococcus radiodurans."
    Seetharaman J., Neely H., Wang H., Janjua H., Foote E.L., Xiao R., Everett J.K., Acton T.B., Rost B., Montelione G.T., Hunt J.F., Tong L.
    Submitted (FEB-2009) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS) OF 98-243.

Entry informationi

Entry nameiQ9RZE3_DEIRA
AccessioniPrimary (citable) accession number: Q9RZE3
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: March 16, 2016
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.