Unreviewed, UniProtKB/TrEMBL Q9RYH1 (Q9RYH1_DEIRA)

Names and origin

Protein names

Submitted name:
    GGDEF family protein EMBL AAF12440.1

Gene names

Ordered Locus Names:

DR_A0342

Organism

Deinococcus radiodurans [Complete proteome] [HAMAP]

Taxonomic identifier

1299 [NCBI]

Taxonomic lineage

Bacteria › Deinococcus-Thermus › Deinococci › Deinococcales › Deinococcaceae › Deinococcus

Protein attributes

Sequence length	860 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Predicted.

Ontologies

Keywords
Domain	Repeat RuleBase RU003537V0 TPR repeat RuleBase RU003339V0
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	binding Inferred from electronic annotation. Source: InterPro catalytic activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9RYH1-1 [UniParc]. Last modified May 1, 2000. Version 1. Checksum: 48278DD4D0F788EE	FASTA	860	95,439
	10 20 30 40 50 60 MLLRLPLLDL TPLPAPFYEL AKDVEQSLIT DPEKAREVAA KLHAATDTAQ GLHRAYAELL 70 80 90 100 110 120 LARTLLSTRQ WQAALESFEK ARKSLLALER AALVAHAVLG RVYILLGTGQ YAEASAEAAE 130 140 150 160 170 180 LEAQLANGPV QAMEIRALAL NAIAYAEYAQ GRPVQAINHL KEALKLREQL SPIIIAACLC 190 200 210 220 230 240 NLGISNIEQG NYREAIYWLM EAYRAHPDSN EDRQLELATL TNLAYAHYLA GDLSLATEIT 250 260 270 280 290 300 QKAYAAAGEW QSYKVRAYSA LNLGTYNTEL QQTGRARSYL QEALVLSQTQ PELTADAVLR 310 320 330 340 350 360 ASILDSLGTL EHQDGNSESA LELYTRAREI AQRDELPAVE ALTQLNIGRM LGQLGRPEAR 370 380 390 400 410 420 AELERALELA VAACLFKEQF EAHTALAELT AAAADWRSAY RHQQELTRLK LHLLEGEHER 430 440 450 460 470 480 QRKELRAELD LEQMRREGEL SRERLKIEVA ARERAEAETL ERTQQLAQAQ REVVLCLALA 490 500 510 520 530 540 AEYRDSITGE HIKRVGTFAA HIALALGWSQ ADAELLMLAS RLHDVGKIGI PDSILLKPGK 550 560 570 580 590 600 LTEVEYVQMQ AHTLIGSQIL GQGNSALLKL AQTIALSHHE RWNGEGYPYG LHGEAIPLAG 610 620 630 640 650 660 RIVAVADVYD ALIQRRPYKA AWTPEQAAAE LSAQAGRHFD PALVEVALRI LNDVHYSVDE 670 680 690 700 710 720 LKELGPPTVG PAAASLEREL ALRTQELQEA RKNAGELLQL ALSDSLTGLH NRRALELDLE 730 740 750 760 770 780 QRIYPGAVDF YMTSLDLDSL KEINDSQGHQ YGDQLLRQFA LCLRQSCAAG KTYRIGGDEF 790 800 810 820 830 840 AVLWNLDVTE QDIVQVLRRL PQNLRVTGQP GISFSYGSAC YNRDAATAGD LLRVSDARMY 850 860 RMKVGRRGEE TDSIWFKEDH

References

[1]

"Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1." White O., Eisen J.A., Heidelberg J.F., Hickey E.K., Peterson J.D., Dodson R.J., Haft D.H., Gwinn M.L., Nelson W.C., Richardson D.L., Moffat K.S., Qin H., Jiang L., Pamphile W., Crosby M., Shen M., Vamathevan J.J., Lam P. , McDonald L.A., Utterback T.R., Zalewski C., Makarova K.S., Aravind L., Daly M.J., Minton K.W., Fleischmann R.D., Ketchum K.A., Nelson K.E., Salzberg S.L., Smith H.O., Venter J.C., Fraser C.M. Science 286:1571-1577(1999) [PubMed: 10567266] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 13939 / DSM 20539 / IFO 15346 / LMG 4051 / NCIB 9279 / R1.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AE001825 Genomic DNA. Translation: AAF12440.1.
PIR	B75589.
RefSeq	NP_285665.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	1799596.
GenomeReviews	Gene locus DR_A0342 in contig AE001825_GR.
KEGG	dra:DR_A0342.
NMPDR	fig|243230.1.peg.3155.
TIGR	DR_A0342.
Phylogenomic databases
HOGENOM	Q9RYH1.
Enzyme and pathway databases
BioCyc	DRAD243230:DR_A0342-MON.
Family and domain databases
InterPro	IPR000160. Diguanylate_cyclase-pred. IPR003607. Met-dep_phosphohydro_HD. IPR006674. Met-dep_phosphohydro_HD_sub. IPR001440. TPR-1. IPR011990. TPR-like_helical. IPR013026. TPR_region. IPR019734. TPR_repeat. [Graphical view]
Gene3D	G3DSA:1.25.40.10. TPR-like_helical. 2 hits.
Pfam	PF00990. GGDEF. 1 hit. PF01966. HD. 1 hit. PF00515. TPR_1. 4 hits. [Graphical view]
SMART	SM00267. DUF1. 1 hit. SM00471. HDc. 1 hit. SM00028. TPR. 5 hits. [Graphical view]
TIGRFAMs	TIGR00254. GGDEF. 1 hit.
PROSITE	PS50887. GGDEF. 1 hit. PS50005. TPR. 4 hits. PS50293. TPR_REGION. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9RYH1_DEIRA

Accession

Primary (citable) accession number: Q9RYH1

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	May 1, 2000
Last modified:	June 16, 2009
This is version 52 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)